[BioC] attributes of SAM files

[Sean Davis]

On 11/2/05 7:47 AM, "Assa Yeroslaviz" <Assa.Yeroslaviz at uni-duesseldorf.de>
wrote:

> Hi,
> 
> Is there a way of extracting ONLY a list of the attributes of an output file
> from the siggenes package?
> 
> After doing a sam calculation:
>> A.out <- sam(AE0627999.data, AE0627999.cl,
> B=200,rand=123,gene.names=matrix_all_names[,2])
> 
> I wanted than to look at the attributes of the file:
>> attributes(A.out)
> 
> The List I've got is to long to be observed in my GUI window, so I would like
> to
> know, if there is a possibility to only see the titles of the attributes and
> not
> the whole list.

I'm not sure exactly what you want, but have you looked at:

help(SAM-class)

This is the object returned by SAM.

Sean