[BioC] Is rma in affylmGUI different to affy rma?

[Simon Kidd]

Hi,


We have exported the rma values of our genes from affylmGUI and 
compared them to those from running rma in affy  (eset <- rma(Data) 
)and they appear to be slightly different. Do the two programs do the 
same thing?

thanks,

Simon