September 2011 Archives by date

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Starting: Thu Sep 1 00:51:01 CEST 2011
Ending: Fri Sep 30 21:51:11 CEST 2011
Messages: 103

[Bioc-sig-seq] edgeR glmLRT contrast Argument Gordon K Smyth
[Bioc-sig-seq] using Cuffdiff with biological replicates Jane Merlevede
[Bioc-sig-seq] ChIPpeakAnno annotatePeakInBatch problems in R2.13/ChIPpeakAnno_1.8.0 and R2.13/ChIPpeakAnno_2.0.2 Ou, Jianhong
[Bioc-sig-seq] ChIPpeakAnno annotatePeakInBatch problems in R2.13/ChIPpeakAnno_1.8.0 and R2.13/ChIPpeakAnno_2.0.2 Sonia Leach
[Bioc-sig-seq] using Cuffdiff with biological replicates Martin Morgan
[Bioc-sig-seq] using Cuffdiff with biological replicates Jane Merlevede
[Bioc-sig-seq] ChIPpeakAnno annotatePeakInBatch problems in R2.13/ChIPpeakAnno_1.8.0 and R2.13/ChIPpeakAnno_2.0.2 Ou, Jianhong
[Bioc-sig-seq] ChIPpeakAnno annotatePeakInBatch problems in R2.13/ChIPpeakAnno_1.8.0 and R2.13/ChIPpeakAnno_2.0.2 Zhu, Lihua (Julie)
[Bioc-sig-seq] gaoshan wang peter
[Bioc-sig-seq] gaoshan Sean Davis
[Bioc-sig-seq] gaoshan wang peter
[Bioc-sig-seq] a question wang peter
[Bioc-sig-seq] a question Martin Morgan
[Bioc-sig-seq] who have RNA-seq pipeline code wang peter
[Bioc-sig-seq] a question Joseph Scandura
[Bioc-sig-seq] a question wang peter
[Bioc-sig-seq] who have RNA-seq pipeline code Martin Morgan
[Bioc-sig-seq] who have RNA-seq pipeline code wang peter
[Bioc-sig-seq] who have RNA-seq pipeline code Steve Lianoglou
[Bioc-sig-seq] ChIPpeakAnno annotatePeakInBatch problems in R2.13/ChIPpeakAnno_1.8.0 and R2.13/ChIPpeakAnno_2.0.2 Zhu, Lihua (Julie)
[Bioc-sig-seq] about N statistics wang peter
[Bioc-sig-seq] about N statistics Steve Lianoglou
[Bioc-sig-seq] about N statistics wang peter
[Bioc-sig-seq] about N statistics Martin Morgan
[Bioc-sig-seq] question about replace wang peter
[Bioc-sig-seq] About PhredQuality wang peter
[Bioc-sig-seq] About PhredQuality Martin Morgan
[Bioc-sig-seq] question about N wang peter
[Bioc-sig-seq] question about replace Martin Morgan
[Bioc-sig-seq] question about N Martin Morgan
[Bioc-sig-seq] question about N Steve Lianoglou
[Bioc-sig-seq] About PhredQuality wang peter
[Bioc-sig-seq] About PhredQuality Martin Morgan
[Bioc-sig-seq] who have tag-clean software wang peter
[Bioc-sig-seq] who have tag-clean software Steve Lianoglou
[Bioc-sig-seq] Course: Introduction to R / Bioconductor for Sequence Analysis, October 17-18 Martin Morgan
[Bioc-sig-seq] Course: Introduction to R / Bioconductor for Sequence Analysis, October 17-18 Martin Morgan
[Bioc-sig-seq] a question about write file wang peter
[Bioc-sig-seq] who have tag-clean software wang peter
[Bioc-sig-seq] a question about write file Vincent Carey
[Bioc-sig-seq] a question about write file wang peter
[Bioc-sig-seq] a question about write file Martin Morgan
[Bioc-sig-seq] a question about write file wang peter
[Bioc-sig-seq] edgeR tagwise estimates not converging to common estimate with large prior.n value Sean Ruddy
[Bioc-sig-seq] large BAM files and large bed files Rene Paradis
[Bioc-sig-seq] large BAM files and large BED files Rene Paradis
[Bioc-sig-seq] large BAM files and large BED files Michael Lawrence
[Bioc-sig-seq] large BAM files and large BED files Martin Morgan
[Bioc-sig-seq] edgeR tagwise estimates not converging to common estimate with large prior.n value Gordon K Smyth
[Bioc-sig-seq] edgeR tagwise estimates not converging to common estimate with large prior.n value Sean Ruddy
[Bioc-sig-seq] how to sort reads by ids wang peter
[Bioc-sig-seq] how to sort reads by ids wang peter
[Bioc-sig-seq] how to sort reads by ids Martin Morgan
[Bioc-sig-seq] how to sort reads by ids wang peter
[Bioc-sig-seq] how to sort reads by ids Martin Morgan
[Bioc-sig-seq] the question about fastx_clipper wang peter
[Bioc-sig-seq] large BAM files and large BED files Rene Paradis
[Bioc-sig-seq] large BAM files and large BED files Martin Morgan
[Bioc-sig-seq] how to subset reads or seqs wang peter
[Bioc-sig-seq] how to subset reads or seqs wang peter
[Bioc-sig-seq] large BAM files and large BED files Michael Lawrence
[Bioc-sig-seq] large BAM files and large BED files Martin Morgan
[Bioc-sig-seq] large BAM files and large BED files Rene Paradis
[Bioc-sig-seq] large BAM files and large BED files Martin Morgan
[Bioc-sig-seq] Reads in 3'utr rohan bareja
[Bioc-sig-seq] first remove low quality or adaptor wang peter
[Bioc-sig-seq] large BAM files and large BED files Rene Paradis
[Bioc-sig-seq] how to subset reads or seqs Hervé Pagès
[Bioc-sig-seq] first remove low quality or adaptor Hervé Pagès
[Bioc-sig-seq] how to subset reads or seqs wang peter
[Bioc-sig-seq] Reads in 3'utr Valerie Obenchain
[Bioc-sig-seq] Reads in 3'utr rohan bareja
[Bioc-sig-seq] Reads in 3'utr Valerie Obenchain
[Bioc-sig-seq] how to write a fasta file wang peter
[Bioc-sig-seq] how to write a fasta file Martin Morgan
[Bioc-sig-seq] remove adaptor before remove barcode wang peter
[Bioc-sig-seq] Reads in 3'utr rohan bareja
[Bioc-sig-seq] question about trimLRPatterns wang peter
[Bioc-sig-seq] how to subset reads or seqs Hervé Pagès
[Bioc-sig-seq] remove adaptor before remove barcode Harris A. Jaffee
[Bioc-sig-seq] remove adaptor before remove barcode wang peter
[Bioc-sig-seq] Reads in 3'utr Valerie Obenchain
[Bioc-sig-seq] Read big fastq files in chunks Anita Lerch
[Bioc-sig-seq] Read big fastq files in chunks Martin Morgan
[Bioc-sig-seq] Read big fastq files in chunks Anita Lerch
[Bioc-sig-seq] remove adaptor before remove barcode Harris A. Jaffee
[Bioc-sig-seq] what is wang peter
[Bioc-sig-seq] coverage vector longer than covered area (ScanBam and IRanges)? Francesco Lescai
[Bioc-sig-seq] what is Harris A. Jaffee
[Bioc-sig-seq] question about trimLRPatterns Harris A. Jaffee
[Bioc-sig-seq] a wired problem wang peter
[Bioc-sig-seq] a wired problem Harris A. Jaffee
[Bioc-sig-seq] a wired problem Harris A. Jaffee
[Bioc-sig-seq] Reads in 3'utr rohan bareja
[Bioc-sig-seq] Reads in 3'utr Valerie Obenchain
[Bioc-sig-seq] as.data.frame on GRanges object with DNAStringSet in values Michael Lawrence
[Bioc-sig-seq] ScanBamParam suggestion Janet Young
[Bioc-sig-seq] ScanBamParam suggestion Martin Morgan
[Bioc-sig-seq] Another ScanBamParam suggestion Ivan Gregoretti
[Bioc-sig-seq] Another ScanBamParam suggestion Martin Morgan
[Bioc-sig-seq] Another ScanBamParam suggestion Ivan Gregoretti
[Bioc-sig-seq] Posting to the Bioconductor list without subscribing Dan Tenenbaum
[Bioc-sig-seq] bioc-sig-sequencing list will be removed Dan Tenenbaum

Last message date: Fri Sep 30 21:51:11 CEST 2011
Archived on: Fri Sep 30 21:51:23 CEST 2011

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