[Bioc-sig-seq] a question

Martin Morgan mtmorgan at fhcrc.org
Fri Sep 2 18:23:08 CEST 2011


On 09/02/2011 07:34 AM, wang peter wrote:
> i read the illumina premers document
> ther is a "P" letter in the front of adapters1
> what does it mean?
>
> thx
> shan gao

Hi shan gao,

Please ask questions related to Bioconductor and Bioconductor sequence 
analysis packages on this list; this looks like a good question for your 
local Illumina representative. Martin

>
> Genomic DNA/ChIP-Seq oligonucleotide sequences
>   Adapters1
>   5' P-GATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG
>   5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
>   PCR Primers1
>   5' AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
>   5' CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT
>   Genomic DNA Sequencing Primer
>   5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
> Paired End DNA oligonucleotide sequences
>   PE Adapters1
>   5' P-GATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
>   5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
>   PE PCR Primers1
>   5' AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
>   5' CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT
>   PE Sequencing Primer
>   5' ACACTCTTTCCCTACACGACGCTCTTCCGATCT
>   5' CGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT
>
> 	[[alternative HTML version deleted]]
>
> _______________________________________________
> Bioc-sig-sequencing mailing list
> Bioc-sig-sequencing at r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing


-- 
Computational Biology
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109

Location: M1-B861
Telephone: 206 667-2793



More information about the Bioc-sig-sequencing mailing list