epiCo: Statistical and Viz Tools for Vector-Borne Diseases in Colombia

Provides statistical and visualization tools for the analysis of demographic indicators, and spatio-temporal behavior and characterization of outbreaks of vector-borne diseases (VBDs) in Colombia. It implements travel times estimated in Bravo-Vega C., Santos-Vega M., & Cordovez J.M. (2022), and the endemic channel method (Bortman, M. (1999) <https://iris.paho.org/handle/10665.2/8562>).

Version: 1.0.0
Depends: R (≥ 3.5.0)
Imports: dplyr, ggplot2, ggraph, igraph, incidence, leaflet, lubridate, magrittr, RColorBrewer, rlang, scales, spdep, stats, treemapify, utils
Suggests: checkmate, covr, knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-06-28
DOI: 10.32614/CRAN.package.epiCo
Author: Juan D. Umaña ORCID iD [aut, cre, cph], Juan Montenegro-Torres ORCID iD [aut], Julian Otero ORCID iD [aut], Hugo Gruson ORCID iD [ctb]
Maintainer: Juan D. Umaña <jd.umana10 at uniandes.edu.co>
BugReports: https://github.com/epiverse-trace/epiCo/issues
License: MIT + file LICENSE
URL: https://epiverse-trace.github.io/epiCo/, https://github.com/epiverse-trace/epiCo
NeedsCompilation: no
Materials: README NEWS
CRAN checks: epiCo results [issues need fixing before 2025-01-10]

Documentation:

Reference manual: epiCo.pdf
Vignettes: Analyzing demographic data with epiCo
Building an Endemic Channel with epiCo
Spatiotemporal analyses with epiCo

Downloads:

Package source: epiCo_1.0.0.tar.gz
Windows binaries: r-devel: epiCo_1.0.0.zip, r-release: epiCo_1.0.0.zip, r-oldrel: epiCo_1.0.0.zip
macOS binaries: r-release (arm64): epiCo_1.0.0.tgz, r-oldrel (arm64): epiCo_1.0.0.tgz, r-release (x86_64): epiCo_1.0.0.tgz, r-oldrel (x86_64): epiCo_1.0.0.tgz

Linking:

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