CRAN Package Check Results for Maintainer ‘Junwei Han <hanjunwei1981 at 163.com>’

Last updated on 2025-07-29 12:49:01 CEST.

Package ERROR NOTE OK
CITMIC 13
DrugSim2DR 3 2 8
DRviaSPCN 2 11
DTSEA 13
ICDS 1 12
IDMIR 2 11
iPRISM 13
MiRSEA 2 11
pathwayTMB 2 11
PMAPscore 1 2 10
ProgModule 13
psSubpathway 2 11
SMDIC 13
ssMutPA 13
SubtypeDrug 1 3 9

Package CITMIC

Current CRAN status: OK: 13

Package DrugSim2DR

Current CRAN status: ERROR: 3, NOTE: 2, OK: 8

Version: 0.1.1
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘base’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.1.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'DrugSim2DR.Rmd' using rmarkdown Quitting from DrugSim2DR.Rmd:107-115 [unnamed-chunk-7] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! error in evaluating the argument 'x' in selecting a method for function 'as.matrix': subscript out of bounds --- Backtrace: ▆ 1. ├─DrugSim2DR::plotDrugstructure("DB00780") 2. │ ├─sp::plot(sdfset) 3. │ └─sp::plot(sdfset) 4. │ └─ChemmineR (local) .local(x, ...) 5. │ └─ChemmineR::plotStruc(sdf = x[[i]], main = print_cid[i], ...) 6. │ ├─base::cbind(...) 7. │ ├─base::as.matrix(bonds(sdf, type = "bonds")[, -1]) 8. │ └─ChemmineR::bonds(sdf, type = "bonds") 9. │ └─ChemmineR (local) .bonds(x, type) 10. └─base (local) `<fn>`(`<sbscOOBE>`) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'DrugSim2DR.Rmd' failed with diagnostics: error in evaluating the argument 'x' in selecting a method for function 'as.matrix': subscript out of bounds --- failed re-building 'DrugSim2DR.Rmd' SUMMARY: processing the following file failed: 'DrugSim2DR.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64

Version: 0.1.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘DrugSim2DR.Rmd’ using rmarkdown Quitting from DrugSim2DR.Rmd:107-115 [unnamed-chunk-7] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! error in evaluating the argument 'x' in selecting a method for function 'as.matrix': subscript out of bounds --- Backtrace: ▆ 1. ├─DrugSim2DR::plotDrugstructure("DB00780") 2. │ ├─sp::plot(sdfset) 3. │ └─sp::plot(sdfset) 4. │ └─ChemmineR (local) .local(x, ...) 5. │ └─ChemmineR::plotStruc(sdf = x[[i]], main = print_cid[i], ...) 6. │ ├─base::cbind(...) 7. │ ├─base::as.matrix(bonds(sdf, type = "bonds")[, -1]) 8. │ └─ChemmineR::bonds(sdf, type = "bonds") 9. │ └─ChemmineR (local) .bonds(x, type) 10. └─base (local) `<fn>`(`<sbscOOBE>`) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'DrugSim2DR.Rmd' failed with diagnostics: error in evaluating the argument 'x' in selecting a method for function 'as.matrix': subscript out of bounds --- failed re-building ‘DrugSim2DR.Rmd’ SUMMARY: processing the following file failed: ‘DrugSim2DR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

Version: 0.1.1
Check: package dependencies
Result: ERROR Package required but not available: ‘ChemmineR’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-x86_64

Package DRviaSPCN

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.5
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: data 5.4Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package DTSEA

Current CRAN status: OK: 13

Package ICDS

Current CRAN status: ERROR: 1, OK: 12

Version: 0.1.3
Check: package dependencies
Result: ERROR Package required but not available: ‘org.Hs.eg.db’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-arm64

Package IDMIR

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.0
Check: installed package size
Result: NOTE installed size is 5.2Mb sub-directories of 1Mb or more: data 5.0Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package iPRISM

Current CRAN status: OK: 13

Package MiRSEA

Current CRAN status: NOTE: 2, OK: 11

Version: 1.1.1
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Junwei Han <hanjunwei1981@163.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Junwei", family = "Han", role = c("aut", "cre"), email = "hanjunwei1981@163.com"), person(given = "Siyao", family = "Liu", role = "aut")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package pathwayTMB

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.3
Check: dependencies in R code
Result: NOTE Namespaces in Imports field not imported from: ‘clusterProfiler’ ‘purrr’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package PMAPscore

Current CRAN status: ERROR: 1, NOTE: 2, OK: 10

Version: 0.1.1
Check: dependencies in R code
Result: NOTE Namespaces in Imports field not imported from: ‘base’ ‘grDevices’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.1.1
Check: package dependencies
Result: ERROR Package required but not available: ‘org.Hs.eg.db’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-arm64

Package ProgModule

Current CRAN status: OK: 13

Package psSubpathway

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.3
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Junwei Han <hanjunwei1981@163.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Xudong", family = "Han", role = "aut"), person(given = "Junwei", family = "Han", role = c("aut", "cre"), email = "hanjunwei1981@163.com"), person(given = "Qing", family = "Fei", role = "aut")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package SMDIC

Current CRAN status: OK: 13

Package ssMutPA

Current CRAN status: OK: 13

Package SubtypeDrug

Current CRAN status: ERROR: 1, NOTE: 3, OK: 9

Version: 0.1.9
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Junwei Han <hanjunwei1981@163.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Xudong", family = "Han", role = "aut"), person(given = "Junwei", family = "Han", role = c("aut", "cre"), email = "hanjunwei1981@163.com"), person(given = "Chonghui", family = "Liu", role = "aut")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.9
Check: package dependencies
Result: ERROR Package required but not available: ‘ChemmineR’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-x86_64

Version: 0.1.9
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: data 5.0Mb Flavor: r-oldrel-macos-x86_64