[R-sig-ME] Error in glmmADMB: no PSV file found -- link to known fix is broken
Ben Bolker
bbolker at gmail.com
Thu Sep 29 21:59:27 CEST 2016
The maintainer has let me know the new URL is
http://buildbot.admb-project.org/glmmadmb/ . I'll update the
documentation/web page
-------- Forwarded Message --------
Subject: [R-sig-ME] Error in glmmADMB: no PSV file found -- link to
known fix is broken
Date: Thu, 29 Sep 2016 12:36:42 -0500
From: Mark Albins <kamokoi55 at gmail.com <mailto:kamokoi55 at gmail.com>>
To: r-sig-mixed-models at r-project.org
<mailto:r-sig-mixed-models at r-project.org>
Hi r-sig-ME-ers,
I'm running a glmmADMB model with a single random effect, zero
inflation,
and a negative binomial distribution (session info below). The
model seems
to run fine on its own (i.e. no error message, sensible outcome,
etc.), but
throws a "no PSV file found" error when I try to run it with mcmc =
TRUE.
I found the following solution to a similar problem posted here on the
r-sig-ME list:
https://stat.ethz.ch/pipermail/r-sig-mixed-models/2016q1/024490.html
<https://stat.ethz.ch/pipermail/r-sig-mixed-models/2016q1/024490.html>
Unfortunately, when I tried to follow the instructions at:
http://glmmadmb.r-forge.r-project.org/
<http://glmmadmb.r-forge.r-project.org/>
..I found the link to the "Buildbot page" was broken...
http://www.admb-project.org/buildbot/glmmadmb/
<http://www.admb-project.org/buildbot/glmmadmb/>
A google search for "glmmADMB buildbot page" did not uncover any obvious
alternate locations for the various OS compatible binaries.
I don't know how to build the binary from its TPL on my system.
Any suggestions?
Thanks!
Mark Albins
R version 3.3.1 (2016-06-21)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United
States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] glmmADMB_0.8.3.3 MASS_7.3-45 ggplot2_2.1.0 lattice_0.20-33
[5] nlme_3.1-128
loaded via a namespace (and not attached):
[1] Rcpp_0.12.6 digest_0.6.10 grid_3.3.1 plyr_1.8.4
[5] gtable_0.2.0 magrittr_1.5 coda_0.18-1 scales_0.4.0
[9] stringi_1.1.1 Matrix_1.2-6 labeling_0.3 tools_3.3.1
[13] stringr_1.1.0 munsell_0.4.3 colorspace_1.2-6 R2admb_0.7.13
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