[R-sig-ME] Error in glmmADMB: no PSV file found -- link to known fix is broken

Ben Bolker bbolker at gmail.com
Thu Sep 29 21:02:20 CEST 2016


  The ADMB web site migrated in the recent past, apparently breaking
this link.  I have an e-mail in to the site maintainer to ask if there's
a way to restore this link ...

  cheers
    Ben Bolker

On 16-09-29 01:36 PM, Mark Albins wrote:
> Hi r-sig-ME-ers,
> 
> I'm running a glmmADMB model with a single random effect, zero inflation,
> and a negative binomial distribution (session info below).  The model seems
> to run fine on its own (i.e. no error message, sensible outcome, etc.), but
> throws a "no PSV file found" error when I try to run it with mcmc = TRUE.
> 
> I found the following solution to a similar problem posted here on the
> r-sig-ME list:
> 
> https://stat.ethz.ch/pipermail/r-sig-mixed-models/2016q1/024490.html
> 
> Unfortunately, when I tried to follow the instructions at:
> 
> http://glmmadmb.r-forge.r-project.org/
> 
> ..I found the link to the "Buildbot page" was broken...
> 
> http://www.admb-project.org/buildbot/glmmadmb/
> 
> A google search for "glmmADMB buildbot page" did not uncover any obvious
> alternate locations for the various OS compatible binaries.
> 
> I don't know how to build the binary from its TPL on my system.
> 
> Any suggestions?
> 
> Thanks!
> 
> Mark Albins
> 
> R version 3.3.1 (2016-06-21)
> Platform: x86_64-w64-mingw32/x64 (64-bit)
> Running under: Windows 7 x64 (build 7601) Service Pack 1
> 
> locale:
> [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United
> States.1252
> [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
> [5] LC_TIME=English_United States.1252
> 
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
> 
> other attached packages:
> [1] glmmADMB_0.8.3.3 MASS_7.3-45      ggplot2_2.1.0    lattice_0.20-33
> [5] nlme_3.1-128
> 
> loaded via a namespace (and not attached):
>  [1] Rcpp_0.12.6      digest_0.6.10    grid_3.3.1       plyr_1.8.4
>  [5] gtable_0.2.0     magrittr_1.5     coda_0.18-1      scales_0.4.0
>  [9] stringi_1.1.1    Matrix_1.2-6     labeling_0.3     tools_3.3.1
> [13] stringr_1.1.0    munsell_0.4.3    colorspace_1.2-6 R2admb_0.7.13
> 
> 	[[alternative HTML version deleted]]
> 
> _______________________________________________
> R-sig-mixed-models at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-sig-mixed-models
>



More information about the R-sig-mixed-models mailing list