[R-sig-ME] incorporate pedigree into lmer
Doran, Harold
HDoran at air.org
Tue Feb 6 13:50:52 CET 2007
Jon
I think you will find the members of this list helpful, but you have given zero information that we can use to help you with your problem. Please provide a representation of your model and a description of your data. Or better yet, some sample data. I don't have any idea what an "animal model" is (maybe others do), but if you can provide a statistical representation, maybe we can walk you through this.
Harold
> -----Original Message-----
> From: r-sig-mixed-models-bounces at r-project.org
> [mailto:r-sig-mixed-models-bounces at r-project.org] On Behalf
> Of Jon Hallander
> Sent: Tuesday, February 06, 2007 7:07 AM
> To: r-sig-mixed-models at r-project.org
> Subject: [R-sig-ME] incorporate pedigree into lmer
>
> Hello,
>
> I am a novice using the lme4 library and would like some help
> regarding the function lmer. I would like to solve the animal
> model using several random effects (e.g. individual (animal)
> and dominance effects). Also, I would like to infer the
> additive and dominance relationship matrices (covariance
> matrices). The function pedigree can set up the pedigree
> structure, but how do I use it in the lmer function? I have
> not found any convenient example.
> Thanks in advance.
>
> Best regards,
> Jon Hallander
>
> ____________________________________________
>
> Jon Hallander
> Department of Forest Genetics and Plant Physiology Swedish
> University of Agricultural Sciences
> SE-901 83 UMEÅ
> SWEDEN
> Phone: +46 90 786 82 80
> Mobile: +46 70 220 08 79
> Fax: +46 90 786 81 65
> E-mail: jon.hallander at genfys.slu.se
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