[R-meta] mismatch in outputs from meta-analysis and corresponding forest plot
Joao Afonso
jot@|on@o @end|ng |rom gm@||@com
Mon Feb 3 18:59:23 CET 2020
Dear all,
I am conducting a meta-analysis and came across an odd issue. I ran the
model for assessing the moderator effect of a variable as per below
*subganal.lcmbi=rma(yi, vi, data=ies.logit.lcmbi, mods=~lcmbi,
method="DL")pes.logit.lcm=rma(yi, vi, data=ies.logit.lcmbi,
mods=~lcmbi=="Records", method="DL")pes.logit.records=rma(yi, vi,
data=ies.logit.lcmbi, mods=~lcmbi=="Locomotion Scoring Method",
method="DL")pes.subg.lcmbi=predict(subganal.lcmbi,transf=transf.ilogit)dat.samevar=data.frame(estimate=c((pes.logit.lcm$b)[1],
(pes.logit.records$b)[1]),stderror=c((pes.logit.lcm$se)[1],
(pes.logit.records$se)[1]),tau2=subganal.lcmbi$tau2)pes.logit.lcm=rma(estimate,
sei=stderror,method="DL",data=dat.samevar)pes.lcmbi=predict(pes.logit.lcm,
transf=transf.ilogit)print(pes.logit.lcm, digits=3) #display subgroup 1
summary effect sizeprint(pes.logit.records, digits=3) #display subgroup 2
summary effect sizeprint(subganal.lcmbi, digits=3) #display subgroup
analysis resultsprint(pes.lcmbi, digits=3) #display recomputed summary
effect size*
and got the following output
* pred ci.lb <http://ci.lb> ci.ub cr.lb <http://cr.lb> cr.ub 0.237 0.149
0.355 0.112 0.434*
However when plotting the corresponding forest plot I get the pooled at
0.27 (0.08 - 0.53).
Any idea of what could be producing this or what could I be doing wrong?
Many thanks,
Joao
--
João Afonso
*DVM, MSc Veterinary Epidemiology*
*PhD Student *
*Department of Infection and Global Health*
*University of Liverpool*
*+351914812305*
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