[R-meta] Questions about phylogenetic meta-analisys

Rafael Rios biorafaelrm at gmail.com
Wed Sep 27 20:48:51 CEST 2017


Dear Dr. Wolfgang Viechtbauer and other meta-analysists,

I am trying to conduct a phylogenetic meta-analysis using function rma.mv
with the following format:

meta1=rma.mv(zf, sezf, mods= ~phylum,
             random = list (~1|study, ~1|species, ~1|field),
             R=list(species=phylo),
             data = h1)

Where I have a moderator (phylum) and three random variables (study,
species and if it was an observational or experimental study). We included
phylogenetic correlation matrix (phylo) in argument R. However, I found the
following error message: "Error in R[[j]][s.levels[[j]], s.levels[[j]]] :
subscript out of bounds". I also tryied to use a matrix with phylogenetic
distances, but I found the same error. I hope that this e-mail finds you
well.

Best wishes,

Rafael R. Moura.
*scientia amabilis*

Doutorando da Pós-graduação em Ecologia e Conservação de Recursos Naturais
Universidade Federal de Uberlândia, Uberlândia, MG, Brasil

ORCID: http://orcid.org/0000-0002-7911-4734
Currículo Lattes:
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4244908A8
Research Gate: https://www.researchgate.net/profile/Rafael_Rios_Moura2


<http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4244908A8>

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