[R-SIG-Mac] List of unnecessary messages when I plot something in R from Terminal

Duncan Murdoch murdoch@dunc@n @end|ng |rom gm@||@com
Sat Feb 11 23:53:26 CET 2023


That's right.  The releases are based on what's known when they are 
released, not what will be known in the future.

And statisticians are supposed to be good at prediction...

Duncan Murdoch

On 11/02/2023 4:53 p.m., Jeff Newmiller wrote:
> Operating systems are designed to be as backward-compatible as possible... R Core doesn't generally know what distinguishing features will identify a new OS until it is released, nor what it will be called, so R has a handicap.
> 
> On February 11, 2023 1:12:42 PM PST, Christofer Bogaso <bogaso.christofer using gmail.com> wrote:
>> Actually when I check from the Apple icon, then I see that I am
>> actually running Ventura
>>
>> For some reason, R's sessionInfo() is reporting that I am running Big Sur.
>>
>> Not sure why R is reporting wrong. Thanks,
>>
>> On Sun, Feb 12, 2023 at 2:38 AM Christofer Bogaso
>> <bogaso.christofer using gmail.com> wrote:
>>>
>>> Hi,
>>>
>>> I am running Big Sur. Below is my sessionInfo()
>>>
>>>> sessionInfo()
>>>
>>> R version 4.2.1 (2022-06-23)
>>>
>>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>>
>>> Running under: macOS Big Sur ... 10.16
>>>
>>>
>>> Matrix products: default
>>>
>>> BLAS:   /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRblas.0.dylib
>>>
>>> LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
>>>
>>>
>>> locale:
>>>
>>> [1] C/UTF-8/C/C/C/C
>>>
>>>
>>> attached base packages:
>>>
>>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>>
>>>
>>> loaded via a namespace (and not attached):
>>>
>>> [1] compiler_4.2.1
>>>
>>> On Sun, Feb 12, 2023 at 1:55 AM Simon Urbanek
>>> <simon.urbanek using r-project.org> wrote:
>>>>
>>>> Christofer,
>>>>
>>>> yes, unfortunately this is a known bug in macOS Ventura affecting a lot of command-line programs that use GUI. Do not upgrade to Ventura (usually a good advice given the long list of known bugs in Ventura) or wait for a fix from Apple.
>>>>
>>>> Cheers,
>>>> Simon
>>>>
>>>>
>>>>
>>>>> On Feb 11, 2023, at 11:28 PM, Christofer Bogaso <bogaso.christofer using gmail.com> wrote:
>>>>>
>>>>> Hi,
>>>>>
>>>>> When I plot something in R, then it open Quartz and in the console I
>>>>> see below messages
>>>>>
>>>>>> plot(1:4)
>>>>>
>>>>>> 1   HIToolbox                           0x00007ff8229a2726 _ZN15MenuBarInstance22EnsureAutoShowObserverEv + 102
>>>>>
>>>>> 2   HIToolbox                           0x00007ff8229a22b8
>>>>> _ZN15MenuBarInstance14EnableAutoShowEv + 52
>>>>>
>>>>> 3   HIToolbox                           0x00007ff822946908
>>>>> SetMenuBarObscured + 408
>>>>>
>>>>> 4   HIToolbox                           0x00007ff8229464ca
>>>>> _ZN13HIApplication15HandleActivatedEP14OpaqueEventRefhP15OpaqueWindowPtrh
>>>>> + 164
>>>>>
>>>>> 5   HIToolbox                           0x00007ff822940996
>>>>> _ZN13HIApplication13EventObserverEjP14OpaqueEventRefPv + 252
>>>>>
>>>>> 6   HIToolbox                           0x00007ff822908bd2
>>>>> _NotifyEventLoopObservers + 153
>>>>>
>>>>> 7   HIToolbox                           0x00007ff8229403e6
>>>>> AcquireEventFromQueue + 494
>>>>>
>>>>> 8   HIToolbox                           0x00007ff82292f3ec
>>>>> ReceiveNextEventCommon + 285
>>>>>
>>>>> 9   HIToolbox                           0x00007ff82292f2b3
>>>>> _BlockUntilNextEventMatchingListInModeWithFilter + 70
>>>>>
>>>>> 10  AppKit                              0x00007ff81c136f33 _DPSNextEvent + 909
>>>>>
>>>>> 11  AppKit                              0x00007ff81c135db4
>>>>> -[NSApplication(NSEvent)
>>>>> _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1219
>>>>>
>>>>> 12  grDevices.so                        0x00000001086f7a3b input_handler + 155
>>>>>
>>>>> 13  libR.dylib                          0x0000000108b142cf
>>>>> Rstd_ReadConsole + 2127
>>>>>
>>>>> 14  libR.dylib                          0x0000000108a15b74
>>>>> Rf_ReplIteration + 100
>>>>>
>>>>> 15  libR.dylib                          0x0000000108a174b1 R_ReplConsole + 161
>>>>>
>>>>> 16  libR.dylib                          0x0000000108a17402 run_Rmainloop + 82
>>>>>
>>>>> 17  libR.dylib                          0x0000000108a1753e Rf_mainloop + 14
>>>>>
>>>>> 18  R                                   0x000000010847af5b main + 27
>>>>>
>>>>> 19  dyld                                0x00007ff818bde310 start + 2432
>>>>>
>>>>> 1   HIToolbox                           0x00007ff822aa952b
>>>>> _ZN15MenuBarInstance21IsAutoShowHideAllowedEv + 259
>>>>>
>>>>> 2   HIToolbox                           0x00007ff8229a233e
>>>>> _ZN15MenuBarInstance24UpdateAutoShowVisibilityE5Pointh + 34
>>>>>
>>>>> 3   HIToolbox                           0x00007ff8229117a4
>>>>> _ZN15MenuBarInstance16ForEachMenuBarDoEU13block_pointerFvPS_E + 46
>>>>>
>>>>> 4   HIToolbox                           0x00007ff8229a293d
>>>>> _ZN15MenuBarInstance20AutoShowHideObserverEjP14OpaqueEventRefPv + 165
>>>>>
>>>>> 5   HIToolbox                           0x00007ff822908bd2
>>>>> _NotifyEventLoopObservers + 153
>>>>>
>>>>> 6   HIToolbox                           0x00007ff82293afb8
>>>>> PostEventToQueueInternal + 700
>>>>>
>>>>> 7   HIToolbox                           0x00007ff82293c871
>>>>> _ZL29CreateAndPostEventWithCGEventP9__CGEventjhP17__CFMachPortBoost +
>>>>> 404
>>>>>
>>>>> 8   HIToolbox                           0x00007ff822948ee9
>>>>> _ZL15Convert1CGEventh + 246
>>>>>
>>>>> 9   HIToolbox                           0x00007ff822948d91
>>>>> _ZL16MainLoopObserverjP14OpaqueEventRefPv + 41
>>>>>
>>>>> 10  HIToolbox                           0x00007ff822908bd2
>>>>> _NotifyEventLoopObservers + 153
>>>>>
>>>>> 11  HIToolbox                           0x00007ff82292f726
>>>>> RunCurrentEventLoopInMode + 228
>>>>>
>>>>> 12  HIToolbox                           0x00007ff82292f396
>>>>> ReceiveNextEventCommon + 199
>>>>>
>>>>> 13  HIToolbox                           0x00007ff82292f2b3
>>>>> _BlockUntilNextEventMatchingListInModeWithFilter + 70
>>>>>
>>>>> 14  AppKit                              0x00007ff81c136f33 _DPSNextEvent + 909
>>>>>
>>>>> 15  AppKit                              0x00007ff81c135db4
>>>>> -[NSApplication(NSEvent)
>>>>> _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1219
>>>>>
>>>>> 16  grDevices.so                        0x00000001086f7a3b input_handler + 155
>>>>>
>>>>> 17  libR.dylib                          0x0000000108b142cf
>>>>> Rstd_ReadConsole + 2127
>>>>>
>>>>> 18  libR.dylib                          0x0000000108a15b74
>>>>> Rf_ReplIteration + 100
>>>>>
>>>>> 19  libR.dylib                          0x0000000108a174b1 R_ReplConsole + 161
>>>>>
>>>>> 20  libR.dylib                          0x0000000108a17402 run_Rmainloop + 82
>>>>>
>>>>> 21  libR.dylib                          0x0000000108a1753e Rf_mainloop + 14
>>>>>
>>>>> 22  R                                   0x000000010847af5b main + 27
>>>>>
>>>>> 23  dyld                                0x00007ff818bde310 start + 2432
>>>>>
>>>>> 1   HIToolbox                           0x00007ff82292f0c2
>>>>> _ZN15MenuBarInstance22RemoveAutoShowObserverEv + 30
>>>>>
>>>>> 2   HIToolbox                           0x00007ff8229467e3
>>>>> SetMenuBarObscured + 115
>>>>>
>>>>> 3   HIToolbox                           0x00007ff82294d29e
>>>>> _ZN13HIApplication11FrontUILostEv + 34
>>>>>
>>>>> 4   HIToolbox                           0x00007ff822946622
>>>>> _ZN13HIApplication15HandleActivatedEP14OpaqueEventRefhP15OpaqueWindowPtrh
>>>>> + 508
>>>>>
>>>>> 5   HIToolbox                           0x00007ff822940950
>>>>> _ZN13HIApplication13EventObserverEjP14OpaqueEventRefPv + 182
>>>>>
>>>>> 6   HIToolbox                           0x00007ff822908bd2
>>>>> _NotifyEventLoopObservers + 153
>>>>>
>>>>> 7   HIToolbox                           0x00007ff8229403e6
>>>>> AcquireEventFromQueue + 494
>>>>>
>>>>> 8   HIToolbox                           0x00007ff82292f3ec
>>>>> ReceiveNextEventCommon + 285
>>>>>
>>>>> 9   HIToolbox                           0x00007ff82292f2b3
>>>>> _BlockUntilNextEventMatchingListInModeWithFilter + 70
>>>>>
>>>>> 10  AppKit                              0x00007ff81c136f33 _DPSNextEvent + 909
>>>>>
>>>>> 11  AppKit                              0x00007ff81c135db4
>>>>> -[NSApplication(NSEvent)
>>>>> _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1219
>>>>>
>>>>> 12  grDevices.so                        0x00000001086f7a77 input_handler + 215
>>>>>
>>>>> 13  libR.dylib                          0x0000000108b142cf
>>>>> Rstd_ReadConsole + 2127
>>>>>
>>>>> 14  libR.dylib                          0x0000000108a15b74
>>>>> Rf_ReplIteration + 100
>>>>>
>>>>> 15  libR.dylib                          0x0000000108a174b1 R_ReplConsole + 161
>>>>>
>>>>> 16  libR.dylib                          0x0000000108a17402 run_Rmainloop + 82
>>>>>
>>>>> 17  libR.dylib                          0x0000000108a1753e Rf_mainloop + 14
>>>>>
>>>>> 18  R                                   0x000000010847af5b main + 27
>>>>>
>>>>> 19  dyld                                0x00007ff818bde310 start + 2432
>>>>>
>>>>> I am using R through Terminal in my Mac
>>>>>
>>>>>> sessionInfo()
>>>>>
>>>>> R version 4.2.1 (2022-06-23)
>>>>>
>>>>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>>>>
>>>>> Running under: macOS Big Sur ... 10.16
>>>>>
>>>>>
>>>>> Matrix products: default
>>>>>
>>>>> BLAS:   /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRblas.0.dylib
>>>>>
>>>>> LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
>>>>>
>>>>>
>>>>> locale:
>>>>>
>>>>> [1] C/UTF-8/C/C/C/C
>>>>>
>>>>>
>>>>> attached base packages:
>>>>>
>>>>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>>>>
>>>>>
>>>>> loaded via a namespace (and not attached):
>>>>>
>>>>> [1] compiler_4.2.1
>>>>>
>>>>> Is there any way to stop/hide these messages?
>>>>>
>>>>> Thanks for your time.
>>>>>
>>>>> _______________________________________________
>>>>> R-SIG-Mac mailing list
>>>>> R-SIG-Mac using r-project.org
>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>>>>>
>>>>
>>
>> _______________________________________________
>> R-SIG-Mac mailing list
>> R-SIG-Mac using r-project.org
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>



More information about the R-SIG-Mac mailing list