[R-SIG-Mac] List of unnecessary messages when I plot something in R from Terminal

Jeff Newmiller jdnewm|| @end|ng |rom dcn@d@v|@@c@@u@
Sat Feb 11 22:53:37 CET 2023


Operating systems are designed to be as backward-compatible as possible... R Core doesn't generally know what distinguishing features will identify a new OS until it is released, nor what it will be called, so R has a handicap.

On February 11, 2023 1:12:42 PM PST, Christofer Bogaso <bogaso.christofer using gmail.com> wrote:
>Actually when I check from the Apple icon, then I see that I am
>actually running Ventura
>
>For some reason, R's sessionInfo() is reporting that I am running Big Sur.
>
>Not sure why R is reporting wrong. Thanks,
>
>On Sun, Feb 12, 2023 at 2:38 AM Christofer Bogaso
><bogaso.christofer using gmail.com> wrote:
>>
>> Hi,
>>
>> I am running Big Sur. Below is my sessionInfo()
>>
>> > sessionInfo()
>>
>> R version 4.2.1 (2022-06-23)
>>
>> Platform: x86_64-apple-darwin17.0 (64-bit)
>>
>> Running under: macOS Big Sur ... 10.16
>>
>>
>> Matrix products: default
>>
>> BLAS:   /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRblas.0.dylib
>>
>> LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
>>
>>
>> locale:
>>
>> [1] C/UTF-8/C/C/C/C
>>
>>
>> attached base packages:
>>
>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>
>>
>> loaded via a namespace (and not attached):
>>
>> [1] compiler_4.2.1
>>
>> On Sun, Feb 12, 2023 at 1:55 AM Simon Urbanek
>> <simon.urbanek using r-project.org> wrote:
>> >
>> > Christofer,
>> >
>> > yes, unfortunately this is a known bug in macOS Ventura affecting a lot of command-line programs that use GUI. Do not upgrade to Ventura (usually a good advice given the long list of known bugs in Ventura) or wait for a fix from Apple.
>> >
>> > Cheers,
>> > Simon
>> >
>> >
>> >
>> > > On Feb 11, 2023, at 11:28 PM, Christofer Bogaso <bogaso.christofer using gmail.com> wrote:
>> > >
>> > > Hi,
>> > >
>> > > When I plot something in R, then it open Quartz and in the console I
>> > > see below messages
>> > >
>> > >> plot(1:4)
>> > >
>> > >> 1   HIToolbox                           0x00007ff8229a2726 _ZN15MenuBarInstance22EnsureAutoShowObserverEv + 102
>> > >
>> > > 2   HIToolbox                           0x00007ff8229a22b8
>> > > _ZN15MenuBarInstance14EnableAutoShowEv + 52
>> > >
>> > > 3   HIToolbox                           0x00007ff822946908
>> > > SetMenuBarObscured + 408
>> > >
>> > > 4   HIToolbox                           0x00007ff8229464ca
>> > > _ZN13HIApplication15HandleActivatedEP14OpaqueEventRefhP15OpaqueWindowPtrh
>> > > + 164
>> > >
>> > > 5   HIToolbox                           0x00007ff822940996
>> > > _ZN13HIApplication13EventObserverEjP14OpaqueEventRefPv + 252
>> > >
>> > > 6   HIToolbox                           0x00007ff822908bd2
>> > > _NotifyEventLoopObservers + 153
>> > >
>> > > 7   HIToolbox                           0x00007ff8229403e6
>> > > AcquireEventFromQueue + 494
>> > >
>> > > 8   HIToolbox                           0x00007ff82292f3ec
>> > > ReceiveNextEventCommon + 285
>> > >
>> > > 9   HIToolbox                           0x00007ff82292f2b3
>> > > _BlockUntilNextEventMatchingListInModeWithFilter + 70
>> > >
>> > > 10  AppKit                              0x00007ff81c136f33 _DPSNextEvent + 909
>> > >
>> > > 11  AppKit                              0x00007ff81c135db4
>> > > -[NSApplication(NSEvent)
>> > > _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1219
>> > >
>> > > 12  grDevices.so                        0x00000001086f7a3b input_handler + 155
>> > >
>> > > 13  libR.dylib                          0x0000000108b142cf
>> > > Rstd_ReadConsole + 2127
>> > >
>> > > 14  libR.dylib                          0x0000000108a15b74
>> > > Rf_ReplIteration + 100
>> > >
>> > > 15  libR.dylib                          0x0000000108a174b1 R_ReplConsole + 161
>> > >
>> > > 16  libR.dylib                          0x0000000108a17402 run_Rmainloop + 82
>> > >
>> > > 17  libR.dylib                          0x0000000108a1753e Rf_mainloop + 14
>> > >
>> > > 18  R                                   0x000000010847af5b main + 27
>> > >
>> > > 19  dyld                                0x00007ff818bde310 start + 2432
>> > >
>> > > 1   HIToolbox                           0x00007ff822aa952b
>> > > _ZN15MenuBarInstance21IsAutoShowHideAllowedEv + 259
>> > >
>> > > 2   HIToolbox                           0x00007ff8229a233e
>> > > _ZN15MenuBarInstance24UpdateAutoShowVisibilityE5Pointh + 34
>> > >
>> > > 3   HIToolbox                           0x00007ff8229117a4
>> > > _ZN15MenuBarInstance16ForEachMenuBarDoEU13block_pointerFvPS_E + 46
>> > >
>> > > 4   HIToolbox                           0x00007ff8229a293d
>> > > _ZN15MenuBarInstance20AutoShowHideObserverEjP14OpaqueEventRefPv + 165
>> > >
>> > > 5   HIToolbox                           0x00007ff822908bd2
>> > > _NotifyEventLoopObservers + 153
>> > >
>> > > 6   HIToolbox                           0x00007ff82293afb8
>> > > PostEventToQueueInternal + 700
>> > >
>> > > 7   HIToolbox                           0x00007ff82293c871
>> > > _ZL29CreateAndPostEventWithCGEventP9__CGEventjhP17__CFMachPortBoost +
>> > > 404
>> > >
>> > > 8   HIToolbox                           0x00007ff822948ee9
>> > > _ZL15Convert1CGEventh + 246
>> > >
>> > > 9   HIToolbox                           0x00007ff822948d91
>> > > _ZL16MainLoopObserverjP14OpaqueEventRefPv + 41
>> > >
>> > > 10  HIToolbox                           0x00007ff822908bd2
>> > > _NotifyEventLoopObservers + 153
>> > >
>> > > 11  HIToolbox                           0x00007ff82292f726
>> > > RunCurrentEventLoopInMode + 228
>> > >
>> > > 12  HIToolbox                           0x00007ff82292f396
>> > > ReceiveNextEventCommon + 199
>> > >
>> > > 13  HIToolbox                           0x00007ff82292f2b3
>> > > _BlockUntilNextEventMatchingListInModeWithFilter + 70
>> > >
>> > > 14  AppKit                              0x00007ff81c136f33 _DPSNextEvent + 909
>> > >
>> > > 15  AppKit                              0x00007ff81c135db4
>> > > -[NSApplication(NSEvent)
>> > > _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1219
>> > >
>> > > 16  grDevices.so                        0x00000001086f7a3b input_handler + 155
>> > >
>> > > 17  libR.dylib                          0x0000000108b142cf
>> > > Rstd_ReadConsole + 2127
>> > >
>> > > 18  libR.dylib                          0x0000000108a15b74
>> > > Rf_ReplIteration + 100
>> > >
>> > > 19  libR.dylib                          0x0000000108a174b1 R_ReplConsole + 161
>> > >
>> > > 20  libR.dylib                          0x0000000108a17402 run_Rmainloop + 82
>> > >
>> > > 21  libR.dylib                          0x0000000108a1753e Rf_mainloop + 14
>> > >
>> > > 22  R                                   0x000000010847af5b main + 27
>> > >
>> > > 23  dyld                                0x00007ff818bde310 start + 2432
>> > >
>> > > 1   HIToolbox                           0x00007ff82292f0c2
>> > > _ZN15MenuBarInstance22RemoveAutoShowObserverEv + 30
>> > >
>> > > 2   HIToolbox                           0x00007ff8229467e3
>> > > SetMenuBarObscured + 115
>> > >
>> > > 3   HIToolbox                           0x00007ff82294d29e
>> > > _ZN13HIApplication11FrontUILostEv + 34
>> > >
>> > > 4   HIToolbox                           0x00007ff822946622
>> > > _ZN13HIApplication15HandleActivatedEP14OpaqueEventRefhP15OpaqueWindowPtrh
>> > > + 508
>> > >
>> > > 5   HIToolbox                           0x00007ff822940950
>> > > _ZN13HIApplication13EventObserverEjP14OpaqueEventRefPv + 182
>> > >
>> > > 6   HIToolbox                           0x00007ff822908bd2
>> > > _NotifyEventLoopObservers + 153
>> > >
>> > > 7   HIToolbox                           0x00007ff8229403e6
>> > > AcquireEventFromQueue + 494
>> > >
>> > > 8   HIToolbox                           0x00007ff82292f3ec
>> > > ReceiveNextEventCommon + 285
>> > >
>> > > 9   HIToolbox                           0x00007ff82292f2b3
>> > > _BlockUntilNextEventMatchingListInModeWithFilter + 70
>> > >
>> > > 10  AppKit                              0x00007ff81c136f33 _DPSNextEvent + 909
>> > >
>> > > 11  AppKit                              0x00007ff81c135db4
>> > > -[NSApplication(NSEvent)
>> > > _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1219
>> > >
>> > > 12  grDevices.so                        0x00000001086f7a77 input_handler + 215
>> > >
>> > > 13  libR.dylib                          0x0000000108b142cf
>> > > Rstd_ReadConsole + 2127
>> > >
>> > > 14  libR.dylib                          0x0000000108a15b74
>> > > Rf_ReplIteration + 100
>> > >
>> > > 15  libR.dylib                          0x0000000108a174b1 R_ReplConsole + 161
>> > >
>> > > 16  libR.dylib                          0x0000000108a17402 run_Rmainloop + 82
>> > >
>> > > 17  libR.dylib                          0x0000000108a1753e Rf_mainloop + 14
>> > >
>> > > 18  R                                   0x000000010847af5b main + 27
>> > >
>> > > 19  dyld                                0x00007ff818bde310 start + 2432
>> > >
>> > > I am using R through Terminal in my Mac
>> > >
>> > >> sessionInfo()
>> > >
>> > > R version 4.2.1 (2022-06-23)
>> > >
>> > > Platform: x86_64-apple-darwin17.0 (64-bit)
>> > >
>> > > Running under: macOS Big Sur ... 10.16
>> > >
>> > >
>> > > Matrix products: default
>> > >
>> > > BLAS:   /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRblas.0.dylib
>> > >
>> > > LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
>> > >
>> > >
>> > > locale:
>> > >
>> > > [1] C/UTF-8/C/C/C/C
>> > >
>> > >
>> > > attached base packages:
>> > >
>> > > [1] stats     graphics  grDevices utils     datasets  methods   base
>> > >
>> > >
>> > > loaded via a namespace (and not attached):
>> > >
>> > > [1] compiler_4.2.1
>> > >
>> > > Is there any way to stop/hide these messages?
>> > >
>> > > Thanks for your time.
>> > >
>> > > _______________________________________________
>> > > R-SIG-Mac mailing list
>> > > R-SIG-Mac using r-project.org
>> > > https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>> > >
>> >
>
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-- 
Sent from my phone. Please excuse my brevity.



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