[R-SIG-Mac] Installing the "jpeg" package?

[David Winsemius]

On 11/1/19 8:03 PM, Spencer Graves wrote:
> Hello, All:
>
>
>       How can I get the dev files for libjpeg installed under macOS 
> 10.15.1 Catalina?


You probably have the right tools, but it wouldn't hurt to check:


https://cran.r-project.org/bin/macosx/tools/


And have you installed the libjpeg library from the /libs/ directory?


http://mac.r-project.org/libs/

The directions for installation from a Terminal session are at the 
bottom of the page.

I have not updated to Catalina, but the error message suggested that 
jpeglib.h could not be found.


Hope this helps;

David



>
>
>       Simon Urbanek, the maintainer for the "jpeg" package, said I 
> need them to install the "jpeg" package from sources.  I'm unable to 
> get that package to install either as a binary or from sources;  see 
> below.
>
>
>       Suggestions?
>       Thanks,
>       Spencer Graves
>
>
> > update.packages()
> jpeg :
>  Version 0.1-8 installed in 
> /Library/Frameworks/R.framework/Versions/3.6/Resources/library
>  Version 0.1-8.1 available at https://cran.rstudio.com
> Update? (Yes/no/cancel) y
>
>   There is a binary version available but the
>   source version is later:
>      binary  source needs_compilation
> jpeg  0.1-8 0.1-8.1              TRUE
>
> Do you want to install from sources the package which needs 
> compilation? (Yes/no/cancel) y
> installing the source package ‘jpeg’
>
> trying URL 'https://cran.rstudio.com/src/contrib/jpeg_0.1-8.1.tar.gz'
> Content type 'application/x-gzip' length 18116 bytes (17 KB)
> ==================================================
> downloaded 17 KB
>
> * installing *source* package ‘jpeg’ ...
> ** package ‘jpeg’ successfully unpacked and MD5 sums checked
> ** using staged installation
> ** libs
> clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   
> -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk 
> -I/usr/local/include  -fPIC  -Wall -g -O2  -c read.c -o read.o
> In file included from read.c:1:
> ./rjcommon.h:11:10: fatal error: 'jpeglib.h' file not found
> #include <jpeglib.h>
>          ^~~~~~~~~~~
> 1 error generated.
> make: *** [read.o] Error 1
> ERROR: compilation failed for package ‘jpeg’
> * removing 
> ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/jpeg’
> * restoring previous 
> ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/jpeg’
>
> The downloaded source packages are in
> ‘/private/var/folders/mh/mrm_14nx19g13lsnj9zmvwjr0000gn/T/Rtmp8GMSE7/downloaded_packages’ 
>
> Warning message:
> In install.packages(update[instlib == l, "Package"], l, repos = repos,  :
>   installation of package ‘jpeg’ had non-zero exit status
>
> > update.packages()
> jpeg :
>  Version 0.1-8 installed in 
> /Library/Frameworks/R.framework/Versions/3.6/Resources/library
>  Version 0.1-8.1 available at https://cran.rstudio.com
> Update? (Yes/no/cancel) y
>
>   There is a binary version available but the
>   source version is later:
>      binary  source needs_compilation
> jpeg  0.1-8 0.1-8.1              TRUE
>
> Do you want to install from sources the package which needs 
> compilation? (Yes/no/cancel) n
> trying URL 
> 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/jpeg_0.1-8.tgz'
> Content type 'application/x-gzip' length 389601 bytes (380 KB)
> ==================================================
> downloaded 380 KB
>
>
> The downloaded binary packages are in
> /var/folders/mh/mrm_14nx19g13lsnj9zmvwjr0000gn/T//Rtmp8GMSE7/downloaded_packages 
>
>
> > sessionInfo()
> R version 3.6.1 (2019-07-05)
> Platform: x86_64-apple-darwin15.6.0 (64-bit)
> Running under: macOS Catalina 10.15.1
>
> Matrix products: default
> BLAS: 
> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
> LAPACK: 
> /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets
> [6] methods   base
>
> other attached packages:
> [1] bssm_0.1.8
>
> loaded via a namespace (and not attached):
>  [1] Rcpp_1.0.2       lattice_0.20-38  assertthat_0.2.1
>  [4] dplyr_0.8.3      crayon_1.3.4     R6_2.4.0
>  [7] grid_3.6.1       gtable_0.3.0     magrittr_1.5
> [10] coda_0.19-3      scales_1.0.0     ggplot2_3.2.1
> [13] pillar_1.4.2     rlang_0.4.1      lazyeval_0.2.2
> [16] rstudioapi_0.10  diagis_0.1.3-1   tools_3.6.1
> [19] glue_1.3.1       purrr_0.3.3      munsell_0.5.0
> [22] compiler_3.6.1   pkgconfig_2.0.3  colorspace_1.4-1
> [25] tidyselect_0.2.5 gridExtra_2.3    tibble_2.1.3
>
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