[R-SIG-Mac] Installing the "jpeg" package?

Spencer Graves @pencer@gr@ve@ @end|ng |rom prod@y@e@com
Sat Nov 2 04:03:06 CET 2019


Hello, All:


       How can I get the dev files for libjpeg installed under macOS 
10.15.1 Catalina?


       Simon Urbanek, the maintainer for the "jpeg" package, said I need 
them to install the "jpeg" package from sources.  I'm unable to get that 
package to install either as a binary or from sources;  see below.


       Suggestions?
       Thanks,
       Spencer Graves


 > update.packages()
jpeg :
  Version 0.1-8 installed in 
/Library/Frameworks/R.framework/Versions/3.6/Resources/library
  Version 0.1-8.1 available at https://cran.rstudio.com
Update? (Yes/no/cancel) y

   There is a binary version available but the
   source version is later:
      binary  source needs_compilation
jpeg  0.1-8 0.1-8.1              TRUE

Do you want to install from sources the package which needs compilation? 
(Yes/no/cancel) y
installing the source package ‘jpeg’

trying URL 'https://cran.rstudio.com/src/contrib/jpeg_0.1-8.1.tar.gz'
Content type 'application/x-gzip' length 18116 bytes (17 KB)
==================================================
downloaded 17 KB

* installing *source* package ‘jpeg’ ...
** package ‘jpeg’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   
-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk 
-I/usr/local/include  -fPIC  -Wall -g -O2  -c read.c -o read.o
In file included from read.c:1:
./rjcommon.h:11:10: fatal error: 'jpeglib.h' file not found
#include <jpeglib.h>
          ^~~~~~~~~~~
1 error generated.
make: *** [read.o] Error 1
ERROR: compilation failed for package ‘jpeg’
* removing 
‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/jpeg’
* restoring previous 
‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/jpeg’

The downloaded source packages are in
‘/private/var/folders/mh/mrm_14nx19g13lsnj9zmvwjr0000gn/T/Rtmp8GMSE7/downloaded_packages’
Warning message:
In install.packages(update[instlib == l, "Package"], l, repos = repos,  :
   installation of package ‘jpeg’ had non-zero exit status

 > update.packages()
jpeg :
  Version 0.1-8 installed in 
/Library/Frameworks/R.framework/Versions/3.6/Resources/library
  Version 0.1-8.1 available at https://cran.rstudio.com
Update? (Yes/no/cancel) y

   There is a binary version available but the
   source version is later:
      binary  source needs_compilation
jpeg  0.1-8 0.1-8.1              TRUE

Do you want to install from sources the package which needs compilation? 
(Yes/no/cancel) n
trying URL 
'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/jpeg_0.1-8.tgz'
Content type 'application/x-gzip' length 389601 bytes (380 KB)
==================================================
downloaded 380 KB


The downloaded binary packages are in
/var/folders/mh/mrm_14nx19g13lsnj9zmvwjr0000gn/T//Rtmp8GMSE7/downloaded_packages

 > sessionInfo()
R version 3.6.1 (2019-07-05)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Catalina 10.15.1

Matrix products: default
BLAS: 
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: 
/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets
[6] methods   base

other attached packages:
[1] bssm_0.1.8

loaded via a namespace (and not attached):
  [1] Rcpp_1.0.2       lattice_0.20-38  assertthat_0.2.1
  [4] dplyr_0.8.3      crayon_1.3.4     R6_2.4.0
  [7] grid_3.6.1       gtable_0.3.0     magrittr_1.5
[10] coda_0.19-3      scales_1.0.0     ggplot2_3.2.1
[13] pillar_1.4.2     rlang_0.4.1      lazyeval_0.2.2
[16] rstudioapi_0.10  diagis_0.1.3-1   tools_3.6.1
[19] glue_1.3.1       purrr_0.3.3      munsell_0.5.0
[22] compiler_3.6.1   pkgconfig_2.0.3  colorspace_1.4-1
[25] tidyselect_0.2.5 gridExtra_2.3    tibble_2.1.3



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