[R-SIG-Mac] mac OS X 10.5.7 rgdal installation problems

[stephen sefick]

Where is the config.log?

On Thu, Jul 2, 2009 at 11:33 AM, Jan de Leeuw<deleeuw at stat.ucla.edu> wrote:
> As the error message says: see config.log more more details,
> search for "cannot create". It's usually a linking problem,
> or a problem with include files, not a compiler problem per se.
>
> On Jul 2, 2009, at 08:47 , stephen sefick wrote:
>
>> sudo R CMD install --configure-args='--with-proj-include=/sw/bin/proj'
>> rgdal_0.6-9.tar.gz
>> * Installing to library
>> ‘/Library/Frameworks/R.framework/Resources/library’
>> * Installing *source* package ‘rgdal’ ...
>> gdal-config: gdal-config
>> checking for gcc... gcc -arch i386 -std=gnu99
>> checking for C compiler default output file name... configure: error:
>> C compiler cannot create executables
>> See `config.log' for more details.
>> ERROR: configuration failed for package ‘rgdal’
>> * Removing ‘/Library/Frameworks/R.framework/Resources/library/rgdal’
>>
>> there is a C compiler problem?  I have XCode  3.1.2.
>>
>> Stephen Sefick
>>
>> On Thu, Jul 2, 2009 at 10:05 AM, stephen sefick<ssefick at gmail.com> wrote:
>>>
>>> platform       i386-apple-darwin8.11.1
>>> arch           i386
>>> os             darwin8.11.1
>>> system         i386, darwin8.11.1
>>> status
>>> major          2
>>> minor          9.1
>>> year           2009
>>> month          06
>>> day            26
>>> svn rev        48839
>>> language       R
>>> version.string R version 2.9.1 (2009-06-26)
>>>
>>> gdal-config, proj, and ogr are in my path.  I type them at the shell
>>> prompt and they work.  They were installed using fink so they are in
>>> the /sw/bin directory.  The installation did not work without
>>> configuration flags and gave me the same error message that is at the
>>> end of the transcript, so I decided to tell R CMD install where proj
>>> was.  Below is the transcript of my session:
>>>
>>> sudo R CMD install --configure-args='--with-proj=/sw/bin/proj'
>>> rgdal_0.6-9.tar.gz
>>> Password:
>>> * Installing to library
>>> ‘/Library/Frameworks/R.framework/Resources/library’
>>> * Installing *source* package ‘rgdal’ ...
>>> gdal-config: gdal-config
>>> checking for gcc... gcc -arch i386 -std=gnu99
>>> checking for C compiler default output file name... a.out
>>> checking whether the C compiler works... yes
>>> checking whether we are cross compiling... no
>>> checking for suffix of executables...
>>> checking for suffix of object files... o
>>> checking whether we are using the GNU C compiler... yes
>>> checking whether gcc -arch i386 -std=gnu99 accepts -g... yes
>>> checking for gcc -arch i386 -std=gnu99 option to accept ANSI C... none
>>> needed
>>> checking how to run the C preprocessor... gcc -arch i386 -std=gnu99 -E
>>> checking for egrep... grep -E
>>> checking for ANSI C header files... rm: conftest.dSYM: is a directory
>>> rm: conftest.dSYM: is a directory
>>> yes
>>> checking for sys/types.h... yes
>>> checking for sys/stat.h... yes
>>> checking for stdlib.h... yes
>>> checking for string.h... yes
>>> checking for memory.h... yes
>>> checking for strings.h... yes
>>> checking for inttypes.h... yes
>>> checking for stdint.h... yes
>>> checking for unistd.h... yes
>>> checking proj_api.h usability... no
>>> checking proj_api.h presence... no
>>> checking for proj_api.h... no
>>> Error: proj_api.h not found.
>>> If the PROJ.4 library is installed in a non-standard location,
>>> use --configure-args='--with-proj-include=/opt/local/include'
>>> for example, replacing /opt/local/* with appropriate values
>>> for your installation. If PROJ.4 is not installed, install it.
>>> ERROR: configuration failed for package ‘rgdal’
>>> * Removing ‘/Library/Frameworks/R.framework/Resources/library/rgdal’
>>>
>>> any help would be greatly appreciated.
>>
>> --
>> Stephen Sefick
>>
>> Let's not spend our time and resources thinking about things that are
>> so little or so large that all they really do for us is puff us up and
>> make us feel like gods.  We are mammals, and have not exhausted the
>> annoying little problems of being mammals.
>>
>>                                                                -K. Mullis
>>
>> _______________________________________________
>> R-SIG-Mac mailing list
>> R-SIG-Mac at stat.math.ethz.ch
>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
>
> ===
> Jan de Leeuw; Distinguished Professor and Chair, UCLA Department of
> Statistics;
> Director: UCLA Center for Environmental Statistics (CES);
> Editor: Journal of Multivariate Analysis, Journal of Statistical Software;
> US mail: 8125 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
> phone (310)-825-9550;  fax (310)-206-5658;  email: deleeuw at stat.ucla.edu
> .mac: jdeleeuw ++++++  aim: deleeuwjan ++++++ skype: j_deleeuw
> homepages: http://gifi.stat.ucla.edu ++++++ http://www.cuddyvalley.org
>  -------------------------------------------------------------------------------------------------
>          No matter where you go, there you are. --- Buckaroo Banzai
>                   http://gifi.stat.ucla.edu/sounds/nomatter.au
>  -------------------------------------------------------------------------------------------------
>
>
>
>
>
>



-- 
Stephen Sefick

Let's not spend our time and resources thinking about things that are
so little or so large that all they really do for us is puff us up and
make us feel like gods.  We are mammals, and have not exhausted the
annoying little problems of being mammals.

								-K. Mullis