[R-SIG-Mac] grDevices won't load
Steven McCarroll
smccarro at broad.mit.edu
Sun May 28 00:54:15 CEST 2006
Installed R (2.4.0) on new dual-G5 Mac (OS X 10.4.4), on startup get
the following errors involving inability to load grDevices (and then
subsequently can't use graphics functions or any other packages that
have graphics dependencies). Have scanned earlier posts and the R
for Mac Wiki for clues, and have learned that there are potential
issues with library versioning, but am at a loss as to which
libraries may need fixing, or how to fix them (the details of this
case seem different from those examples). Thanks in advance for your
ideas:
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library '/Library/Frameworks/R.framework/
Resources/library/grDevices/libs/ppc/grDevices.so':
dlopen(/Library/Frameworks/R.framework/Resources/library/grDevices/
libs/ppc/grDevices.so, 6): Symbol not found: ___mulsc3
Referenced from: /Library/Frameworks/R.framework/Versions/2.4/
Resources/lib/libgfortran.0.dylib
Expected in: flat namespace
Loading required package: grDevices
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library '/Library/Frameworks/R.framework/
Resources/library/grDevices/libs/ppc/grDevices.so':
dlopen(/Library/Frameworks/R.framework/Resources/library/grDevices/
libs/ppc/grDevices.so, 6): Symbol not found: ___mulsc3
Referenced from: /Library/Frameworks/R.framework/Versions/2.4/
Resources/lib/libgfortran.0.dylib
Expected in: flat namespace
In addition: Warning message:
package grDevices in options("defaultPackages") was not found
Error: package 'grDevices' could not be loaded
[Steven-McCarrolls-G5-Tower:/usr/local/lib] smccarro% ls -l /usr/
local/lib
total 7560
-r-xr-xr-x 1 root wheel 2105617 Feb 3 12:45 libtcl8.4.dylib
-rw-r--r-- 1 root wheel 4748 Feb 3 12:45 libtclstub8.4.a
-r-xr-xr-x 1 root wheel 1730452 Feb 3 12:46 libtk8.4.dylib
-rw-r--r-- 1 root wheel 6236 Feb 3 12:46 libtkstub8.4.a
-rw-r--r-- 1 root wheel 7458 Feb 3 12:45 tclConfig.sh
-rw-r--r-- 1 root wheel 3619 Feb 3 12:46 tkConfig.sh
[Steven-McCarrolls-G5-Tower:/usr/local/lib] smccarro% ls -l /sw/lib
total 14768
drwxr-xr-x 3 root admin 102 Jun 2 2005 apt
drwxr-xr-x 7 root admin 238 Jun 2 2005 dpkg
drwxr-xr-x 6 root admin 204 Jun 2 2005 fink
-rw-r--r-- 1 root admin 790708 Jun 2 2005 libapt-inst.1.0.0.dylib
lrwxr-xr-x 1 root admin 23 May 24 22:52 libapt-inst.
1.0.dylib -> libapt-inst.1.0.0.dylib
-rw-r--r-- 1 root admin 1308600 Jun 2 2005 libapt-pkg.3.2.0.dylib
lrwxr-xr-x 1 root admin 22 May 24 22:52 libapt-pkg.3.2.dylib
-> libapt-pkg.3.2.0.dylib
-rwxr-xr-x 1 root admin 65712 Jun 2 2005 libbz2.1.0.2.dylib
lrwxr-xr-x 1 root admin 18 May 24 22:52 libbz2.1.dylib ->
libbz2.1.0.2.dylib
lrwxr-xr-x 1 root admin 18 May 24 22:52 libbz2.dylib ->
libbz2.1.0.2.dylib
-rw-r--r-- 1 root admin 12976 Jun 2 2005 libcharset.1.0.0.dylib
lrwxr-xr-x 1 root admin 22 May 24 22:52 libcharset.1.dylib -
> libcharset.1.0.0.dylib
-rw-r--r-- 1 root admin 8056 Jun 2 2005 libcharset.a
lrwxr-xr-x 1 root admin 22 May 24 22:52 libcharset.dylib ->
libcharset.1.0.0.dylib
-rw-r--r-- 1 root admin 809 Jun 2 2005 libcharset.la
-rw-r--r-- 1 root admin 60244 Jun 2 2005 libform.5.dylib
-rw-r--r-- 1 root admin 94232 Jun 2 2005 libform.a
lrwxr-xr-x 1 root admin 15 May 24 22:52 libform.dylib ->
libform.5.dylib
lrwxr-xr-x 1 root admin 23 May 24 22:52 libform.dylib.5 -> /
sw/lib/libform.5.dylib
-rw-r--r-- 1 root admin 274816 Jun 2 2005 libform_g.a
-rw-r--r-- 1 root admin 1087556 Jun 2 2005 libiconv.2.2.0.dylib
lrwxr-xr-x 1 root admin 20 May 24 22:52 libiconv.2.dylib ->
libiconv.2.2.0.dylib
lrwxr-xr-x 1 root admin 20 May 24 22:52 libiconv.dylib ->
libiconv.2.2.0.dylib
-rw-r--r-- 1 root admin 785 Jun 2 2005 libiconv.la
-rw-r--r-- 1 root admin 73752 Jun 2 2005 libintl.1.0.1.dylib
lrwxr-xr-x 1 root admin 19 May 24 22:52 libintl.1.dylib ->
libintl.1.0.1.dylib
-rw-r--r-- 1 root admin 93200 Jun 2 2005 libintl.a
lrwxr-xr-x 1 root admin 19 May 24 22:52 libintl.dylib ->
libintl.1.0.1.dylib
-rw-r--r-- 1 root admin 734 Jun 2 2005 libintl.la
-rwxr-xr-x 1 root admin 140652 May 15 2005 libjpeg.62.0.0.dylib
lrwxr-xr-x 1 root admin 20 May 24 23:01 libjpeg.62.dylib ->
libjpeg.62.0.0.dylib
-rw-r--r-- 1 root admin 175864 May 15 2005 libjpeg.a
lrwxr-xr-x 1 root admin 20 May 24 23:01 libjpeg.dylib ->
libjpeg.62.0.0.dylib
-rwxr-xr-x 1 root admin 647 May 15 2005 libjpeg.la
-rw-r--r-- 1 root admin 32328 Jun 2 2005 libmenu.5.dylib
-rw-r--r-- 1 root admin 51384 Jun 2 2005 libmenu.a
lrwxr-xr-x 1 root admin 15 May 24 22:52 libmenu.dylib ->
libmenu.5.dylib
lrwxr-xr-x 1 root admin 23 May 24 22:52 libmenu.dylib.5 -> /
sw/lib/libmenu.5.dylib
-rw-r--r-- 1 root admin 150136 Jun 2 2005 libmenu_g.a
-rwxr-xr-x 1 root admin 127016 Jun 2 2005 libncurses++.a
-rw-r--r-- 1 root admin 285008 Jun 2 2005 libncurses.5.dylib
-rw-r--r-- 1 root admin 507280 Jun 2 2005 libncurses.a
lrwxr-xr-x 1 root admin 18 May 24 22:52 libncurses.dylib ->
libncurses.5.dylib
lrwxr-xr-x 1 root admin 26 May 24 22:52 libncurses.dylib.5 -
> /sw/lib/libncurses.5.dylib
-rw-r--r-- 1 root admin 1090824 Jun 2 2005 libncurses_g.a
-rw-r--r-- 1 root admin 15100 Jun 2 2005 libpanel.5.dylib
-rw-r--r-- 1 root admin 17176 Jun 2 2005 libpanel.a
lrwxr-xr-x 1 root admin 16 May 24 22:52 libpanel.dylib ->
libpanel.5.dylib
lrwxr-xr-x 1 root admin 24 May 24 22:52 libpanel.dylib.5 -> /
sw/lib/libpanel.5.dylib
-rw-r--r-- 1 root admin 54176 Jun 2 2005 libpanel_g.a
-r-xr-xr-x 1 root admin 346620 May 15 2005 libtiff.3.6.1.dylib
lrwxr-xr-x 1 root admin 19 May 24 23:01 libtiff.3.dylib ->
libtiff.3.6.1.dylib
-rw-r--r-- 1 root admin 480008 May 15 2005 libtiff.a
lrwxr-xr-x 1 root admin 15 May 24 23:01 libtiff.dylib ->
libtiff.3.dylib
drwxr-xr-x 6 root admin 204 Jun 2 2005 ncurses
drwxr-xr-x 5 root admin 170 Jun 2 2005 perl5
-rwxr-xr-x 1 root admin 46720 Jun 2 2005 rmt
lrwxr-xr-x 1 root admin 17 May 24 22:52 terminfo -> ../share/
terminfo
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