[R-SIG-Mac] graphviz

Kubovy Michael mk9y at mac.com
Mon Mar 20 03:30:37 CET 2006

Thanks to Seth, Byron, and Julin for their help.

Apparently I had graphviz installed twice (once using fink).

Once I got rid of it, everything worked.

I installed graphviz 2.9 downloaded from http://www.graphviz.org/pub/
graphviz/ARCHIVE/graphviz-2.9.tar.gz and compiled using the commands
% ./configure
% make
% sudo make install

% sudo gcc_select 3.3
% setenv PKG_CONFIG_PATH /usr/local/lib/pkgconfig
% sudo R

R : Copyright 2005, The R Foundation for Statistical Computing
Version 2.2.1  (2005-12-20 r36812)


 > source("http://bioconductor.org/biocLite.R")
 > biocLite("Rgraphviz", type="source")

Running bioCLite version 0.1  with R version  2.2.1

Running biocinstall version 1.1  with R version  2.2.1
trying URL 'http://www.bioconductor.org/packages/bioc/1.7/src/contrib/ 
Content type 'application/x-gzip' length 1666191 bytes
opened URL
downloaded 1627Kb

* Installing *source* package 'Rgraphviz' ...


** building package indices ...
* DONE (Rgraphviz)

The downloaded packages are in

Professor Michael Kubovy
University of Virginia
Department of Psychology
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