[R-SIG-Mac] Rgraphviz alternative (was Re: Rgraphviz installation problem)

[Paul Shannon]

Some users of Rgraphviz may be interested in the new Bioconductor package "gaggle".

It presents possibly fewer installation problems, and provides access to
interactive graph display and manipulation from R via the Cytoscape program.  

Installation instructions may be found at

  http://gaggle.systemsbiology.org/docs/geese/r/

Click on the 'Mac OSX' link to the left on this page.

The vignette describes how to broadcast a network from R to Cytoscape:

  http://www.bioconductor.org/packages/1.9/bioc/vignettes/gaggle/inst/doc/gaggle.pdf

Feedback welcome.

 - Paul Shannon
   Institute for Systems Biology
   Seattle