[R-sig-Geo] MODIS package's runGdal() returns error: dataFormat='GTiff', format not supported

Hakim Abdi hakim.abdi at nateko.lu.se
Tue May 17 09:07:33 CEST 2016 

Same here. Loading rgdal didn't make a difference.

On Tue, May 17, 2016 at 9:05 AM, chris english <
englishchristophera at gmail.com> wrote:

> I suspect it is an incomplete Modis build even though library(Modis) loads
> without complaint, but will have to check into this later. I recall not
> seeing MRT complete...which I think is inscribing a folder though is
> probably much more.
> Having rgdal loaded as against your sessionInfo() didn't make a difference.
> Chris
>
> On Tue, May 17, 2016 at 9:52 AM, chris english <
> englishchristophera at gmail.com> wrote:
>
>> Hi Hakim,
>>
>> Interesting and unexpected as I am on a linux box but I have the same
>> problem, or I can reproduce your's:
>> > sessionInfo()
>> R version 3.2.2 (2015-08-14)
>> Platform: x86_64-pc-linux-gnu (64-bit)
>> Running under: Ubuntu 14.04.4 LTS
>>
>> locale:
>>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
>> LC_TIME=en_US.UTF-8
>>  [4] LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8
>>  LC_MESSAGES=en_US.UTF-8
>>  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C
>>
>> [10] LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8
>> LC_IDENTIFICATION=C
>>
>> attached base packages:
>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>
>> other attached packages:
>> [1] rgdal_1.1-3   MODIS_0.10-34 raster_2.5-2  sp_1.2-1
>>
>> loaded via a namespace (and not attached):
>> [1] rsconnect_0.4.1.11 tools_3.2.2        Rcpp_0.12.4        grid_3.2.2
>>       lattice_0.20-33
>> > dates <- as.POSIXct( as.Date(c("01/01/2010","01/05/2016"),format
>> ="%d/%m/%Y") )
>> > dates <- transDate(dates[1],dates[2])
>> > product <- "MOD13Q1"
>> > bands <- "010"
>> > h = c("21","22")
>> > v = c("07","08")
>> > runGdal(product=product,begin=dates$beginDOY,end = dates$endDOY,tileH =
>> + h,tileV = v, SDSstring = bands, outProj="4326")
>> Error in runGdal(product = product, begin = dates$beginDOY, end =
>> dates$endDOY,  :
>>   in argument dataFormat='GTiff', format not supported by GDAL type:
>> 'gdalWriteDriver()' (column 'name') to list available inputs
>>
>> debugonce(runGdal)
>> #output
>> Browse[2]> n
>> debug: stop("in argument dataFormat='", opts$dataFormat, "', format not
>> supported by GDAL type: 'gdalWriteDriver()' (column 'name') to list
>> available inputs")
>> Browse[2]> n
>> Error in runGdal(product = product, begin = dates$beginDOY, end =
>> dates$endDOY,  :
>>   in argument dataFormat='GTiff', format not supported by GDAL type:
>> 'gdalWriteDriver()' (column 'name') to list available inputs
>> >
>> Hmmmm. More digging. Sorry to not be helpful to this point.
>> Chris
>>
>> On Mon, May 16, 2016 at 11:47 AM, Hakim Abdi <hakim.abdi at nateko.lu.se>
>> wrote:
>>
>>> Hi Alex,
>>>
>>> The OS is a 64 bit Windows 7 as specified in the sessionInfo() output I
>>> posted. When I upgraded QGIS, I did so by uninstalling the previous one and
>>> reinstalling the new version. I'm not quite sure what it means to upgrade
>>> GDAL since I installed it fresh with OSGeo4W. In R, I reinstall all the
>>> packages I need fresh off the repository using the install.views command.
>>>
>>> gdalDrivers() produces the output that's attached.
>>>
>>> Cheers,
>>>
>>> Hakim
>>>
>>>
>>> On Wed, May 11, 2016 at 5:09 PM, Alex Mandel <tech_dev at wildintellect.com
>>> > wrote:
>>>
>>>> What operating system?
>>>> When you upgraded QGIS did you also upgrade GDAL?
>>>> When you upgraded R, did you update your packages (or rebuild any
>>>> packages)?
>>>>
>>>> What do you get from the following command?
>>>> gdalDrivers()
>>>>
>>>> Thanks,
>>>> Alex
>>>>
>>>> On 05/02/2016 02:11 PM, Hakim Abdi wrote:
>>>> > Hello everyone,
>>>> >
>>>> > I'm having problems with the MODIS package, specifically, the
>>>> runGdal()
>>>> > command after the recent update to R 3.2.5. The error I get is this:
>>>> >
>>>> > Error in runGdal(product = product, begin = dates$beginDOY, end =
>>>> > dates$endDOY, : in argument dataFormat='GTiff', format not supported
>>>> by
>>>> > GDAL type: 'gdalWriteDriver()' (column 'name') to list available
>>>> inputs
>>>> >
>>>> > I'm not quite sure why this is happening, and I haven't found a
>>>> solution
>>>> > online. Does anyone have an idea? The package was working fine before
>>>> I
>>>> > upgraded R from 3.1.1. to 3.2.5, QGIS from 2.12.3 to 2.14.1 and
>>>> RStudio to
>>>> > version 0.99.467.
>>>> >
>>>> > My details are below, thanks for the assistance:
>>>> >
>>>> > R version 3.2.5 (2016-04-14) -- "Very, Very Secure Dishes"
>>>> > Copyright (C) 2016 The R Foundation for Statistical Computing
>>>> > Platform: x86_64-w64-mingw32/x64 (64-bit)
>>>> >
>>>> > R is free software and comes with ABSOLUTELY NO WARRANTY.
>>>> > You are welcome to redistribute it under certain conditions.
>>>> > Type 'license()' or 'licence()' for distribution details.
>>>> >
>>>> > R is a collaborative project with many contributors.
>>>> > Type 'contributors()' for more information and
>>>> > 'citation()' on how to cite R or R packages in publications.
>>>> >
>>>> > Type 'demo()' for some demos, 'help()' for on-line help, or
>>>> > 'help.start()' for an HTML browser interface to help.
>>>> > Type 'q()' to quit R.
>>>> >
>>>> >> require(MODIS)
>>>> > Loading required package: MODIS
>>>> > Loading required package: raster
>>>> > Loading required package: sp
>>>> > MODIS_manual:
>>>> >
>>>> https://ivfl-rio.boku.ac.at/owncloud/public.php?service=files&t=660dc830afb091237cc40b3dea2fdf6b
>>>> >
>>>> > Attaching package: ‘MODIS’
>>>> >
>>>> > The following object is masked from ‘package:base’:
>>>> >
>>>> >     file.size
>>>> >
>>>> >> MODISoptions()
>>>> > All suggested packages are installed
>>>> > Detecting available write drivers!
>>>> > Found: 64 candidate drivers, detecting file extensions...
>>>> > 0 usable drivers detected!
>>>> >
>>>> > STORAGE:
>>>> > _______________
>>>> > localArcPath : C:/Users/Hakim/Documents/MODIS_ARC/
>>>> > outDirPath   : C:/Users/Hakim/Documents/MODIS_ARC/PROCESSED/
>>>> >
>>>> >
>>>> > DOWNLOAD:
>>>> > _______________
>>>> > MODISserverOrder : LPDAAC, LAADS
>>>> > dlmethod         : auto
>>>> > stubbornness     : 5
>>>> >
>>>> >
>>>> > PROCESSING:
>>>> > _______________
>>>> > GDAL           : GDAL 2.0.2, released 2016/01/26
>>>> > MRT            : Version 4.1 (March 2011)
>>>> > pixelSize      : asIn
>>>> > outProj        : GEOGRAPHIC
>>>> > resamplingType : NN
>>>> > dataFormat     : GTiff
>>>> >
>>>> >
>>>> > DEPENDENCIES:
>>>> > _______________
>>>> >
>>>> >> dates <- as.POSIXct( as.Date(c("01/01/2010","01/05/2016"),format =
>>>> > "%d/%m/%Y") )
>>>> >> dates <- transDate(dates[1],dates[2])
>>>> >> product <- "MOD13Q1"
>>>> >> bands <- "010"
>>>> >> h = c("21","22")
>>>> >> v = c("07","08")
>>>> > *> runGdal(product=product,begin=dates$beginDOY,end =
>>>> dates$endDOY,tileH =
>>>> > h,tileV = v, SDSstring = bands, outProj="4326")*
>>>> > *Error in runGdal(product = product, begin = dates$beginDOY, end =
>>>> > dates$endDOY,  : **in argument dataFormat='GTiff', format not
>>>> supported by
>>>> > GDAL type: 'gdalWriteDriver()' (column 'name') to list available
>>>> inputs*
>>>> >> sessionInfo()
>>>> > R version 3.2.5 (2016-04-14)
>>>> > Platform: x86_64-w64-mingw32/x64 (64-bit)
>>>> > Running under: Windows 7 x64 (build 7601) Service Pack 1
>>>> >
>>>> > locale:
>>>> > [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United
>>>> > States.1252
>>>> > [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
>>>> >
>>>> > [5] LC_TIME=English_United States.1252
>>>> >
>>>> > attached base packages:
>>>> > [1] stats     graphics  grDevices utils     datasets  methods   base
>>>> >
>>>> > other attached packages:
>>>> > [1] MODIS_0.10-34 raster_2.5-2  sp_1.2-3
>>>> >
>>>> > loaded via a namespace (and not attached):
>>>> > [1] tools_3.2.5     Rcpp_0.12.4     grid_3.2.5      lattice_0.20-33
>>>> >
>>>> >
>>>> >
>>>> > __________________________________________________
>>>> >
>>>> > Hakim Abdi | PhD Candidate
>>>> > Center for Geobiosphere Science
>>>> >
>>>> > Department of Physical Geography and Ecosystem Science
>>>> > Lund University, Sölvegatan 12, SE-223 62 Lund, Sweden
>>>> >
>>>> >       [[alternative HTML version deleted]]
>>>> >
>>>> > _______________________________________________
>>>> > R-sig-Geo mailing list
>>>> > R-sig-Geo at r-project.org
>>>> > https://stat.ethz.ch/mailman/listinfo/r-sig-geo
>>>> >
>>>>
>>>>
>>>
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>>
>>
>

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