[R-sig-Geo] MODIS package's runGdal() returns error: dataFormat='GTiff', format not supported

chris english englishchristophera at gmail.com
Tue May 17 09:05:07 CEST 2016 

I suspect it is an incomplete Modis build even though library(Modis) loads
without complaint, but will have to check into this later. I recall not
seeing MRT complete...which I think is inscribing a folder though is
probably much more.
Having rgdal loaded as against your sessionInfo() didn't make a difference.
Chris

On Tue, May 17, 2016 at 9:52 AM, chris english <
englishchristophera at gmail.com> wrote:

> Hi Hakim,
>
> Interesting and unexpected as I am on a linux box but I have the same
> problem, or I can reproduce your's:
> > sessionInfo()
> R version 3.2.2 (2015-08-14)
> Platform: x86_64-pc-linux-gnu (64-bit)
> Running under: Ubuntu 14.04.4 LTS
>
> locale:
>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
> LC_TIME=en_US.UTF-8
>  [4] LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8
>  LC_MESSAGES=en_US.UTF-8
>  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C
>
> [10] LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8
> LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> other attached packages:
> [1] rgdal_1.1-3   MODIS_0.10-34 raster_2.5-2  sp_1.2-1
>
> loaded via a namespace (and not attached):
> [1] rsconnect_0.4.1.11 tools_3.2.2        Rcpp_0.12.4        grid_3.2.2
>       lattice_0.20-33
> > dates <- as.POSIXct( as.Date(c("01/01/2010","01/05/2016"),format
> ="%d/%m/%Y") )
> > dates <- transDate(dates[1],dates[2])
> > product <- "MOD13Q1"
> > bands <- "010"
> > h = c("21","22")
> > v = c("07","08")
> > runGdal(product=product,begin=dates$beginDOY,end = dates$endDOY,tileH =
> + h,tileV = v, SDSstring = bands, outProj="4326")
> Error in runGdal(product = product, begin = dates$beginDOY, end =
> dates$endDOY,  :
>   in argument dataFormat='GTiff', format not supported by GDAL type:
> 'gdalWriteDriver()' (column 'name') to list available inputs
>
> debugonce(runGdal)
> #output
> Browse[2]> n
> debug: stop("in argument dataFormat='", opts$dataFormat, "', format not
> supported by GDAL type: 'gdalWriteDriver()' (column 'name') to list
> available inputs")
> Browse[2]> n
> Error in runGdal(product = product, begin = dates$beginDOY, end =
> dates$endDOY,  :
>   in argument dataFormat='GTiff', format not supported by GDAL type:
> 'gdalWriteDriver()' (column 'name') to list available inputs
> >
> Hmmmm. More digging. Sorry to not be helpful to this point.
> Chris
>
> On Mon, May 16, 2016 at 11:47 AM, Hakim Abdi <hakim.abdi at nateko.lu.se>
> wrote:
>
>> Hi Alex,
>>
>> The OS is a 64 bit Windows 7 as specified in the sessionInfo() output I
>> posted. When I upgraded QGIS, I did so by uninstalling the previous one and
>> reinstalling the new version. I'm not quite sure what it means to upgrade
>> GDAL since I installed it fresh with OSGeo4W. In R, I reinstall all the
>> packages I need fresh off the repository using the install.views command.
>>
>> gdalDrivers() produces the output that's attached.
>>
>> Cheers,
>>
>> Hakim
>>
>>
>> On Wed, May 11, 2016 at 5:09 PM, Alex Mandel <tech_dev at wildintellect.com>
>> wrote:
>>
>>> What operating system?
>>> When you upgraded QGIS did you also upgrade GDAL?
>>> When you upgraded R, did you update your packages (or rebuild any
>>> packages)?
>>>
>>> What do you get from the following command?
>>> gdalDrivers()
>>>
>>> Thanks,
>>> Alex
>>>
>>> On 05/02/2016 02:11 PM, Hakim Abdi wrote:
>>> > Hello everyone,
>>> >
>>> > I'm having problems with the MODIS package, specifically, the runGdal()
>>> > command after the recent update to R 3.2.5. The error I get is this:
>>> >
>>> > Error in runGdal(product = product, begin = dates$beginDOY, end =
>>> > dates$endDOY, : in argument dataFormat='GTiff', format not supported by
>>> > GDAL type: 'gdalWriteDriver()' (column 'name') to list available inputs
>>> >
>>> > I'm not quite sure why this is happening, and I haven't found a
>>> solution
>>> > online. Does anyone have an idea? The package was working fine before I
>>> > upgraded R from 3.1.1. to 3.2.5, QGIS from 2.12.3 to 2.14.1 and
>>> RStudio to
>>> > version 0.99.467.
>>> >
>>> > My details are below, thanks for the assistance:
>>> >
>>> > R version 3.2.5 (2016-04-14) -- "Very, Very Secure Dishes"
>>> > Copyright (C) 2016 The R Foundation for Statistical Computing
>>> > Platform: x86_64-w64-mingw32/x64 (64-bit)
>>> >
>>> > R is free software and comes with ABSOLUTELY NO WARRANTY.
>>> > You are welcome to redistribute it under certain conditions.
>>> > Type 'license()' or 'licence()' for distribution details.
>>> >
>>> > R is a collaborative project with many contributors.
>>> > Type 'contributors()' for more information and
>>> > 'citation()' on how to cite R or R packages in publications.
>>> >
>>> > Type 'demo()' for some demos, 'help()' for on-line help, or
>>> > 'help.start()' for an HTML browser interface to help.
>>> > Type 'q()' to quit R.
>>> >
>>> >> require(MODIS)
>>> > Loading required package: MODIS
>>> > Loading required package: raster
>>> > Loading required package: sp
>>> > MODIS_manual:
>>> >
>>> https://ivfl-rio.boku.ac.at/owncloud/public.php?service=files&t=660dc830afb091237cc40b3dea2fdf6b
>>> >
>>> > Attaching package: ‘MODIS’
>>> >
>>> > The following object is masked from ‘package:base’:
>>> >
>>> >     file.size
>>> >
>>> >> MODISoptions()
>>> > All suggested packages are installed
>>> > Detecting available write drivers!
>>> > Found: 64 candidate drivers, detecting file extensions...
>>> > 0 usable drivers detected!
>>> >
>>> > STORAGE:
>>> > _______________
>>> > localArcPath : C:/Users/Hakim/Documents/MODIS_ARC/
>>> > outDirPath   : C:/Users/Hakim/Documents/MODIS_ARC/PROCESSED/
>>> >
>>> >
>>> > DOWNLOAD:
>>> > _______________
>>> > MODISserverOrder : LPDAAC, LAADS
>>> > dlmethod         : auto
>>> > stubbornness     : 5
>>> >
>>> >
>>> > PROCESSING:
>>> > _______________
>>> > GDAL           : GDAL 2.0.2, released 2016/01/26
>>> > MRT            : Version 4.1 (March 2011)
>>> > pixelSize      : asIn
>>> > outProj        : GEOGRAPHIC
>>> > resamplingType : NN
>>> > dataFormat     : GTiff
>>> >
>>> >
>>> > DEPENDENCIES:
>>> > _______________
>>> >
>>> >> dates <- as.POSIXct( as.Date(c("01/01/2010","01/05/2016"),format =
>>> > "%d/%m/%Y") )
>>> >> dates <- transDate(dates[1],dates[2])
>>> >> product <- "MOD13Q1"
>>> >> bands <- "010"
>>> >> h = c("21","22")
>>> >> v = c("07","08")
>>> > *> runGdal(product=product,begin=dates$beginDOY,end =
>>> dates$endDOY,tileH =
>>> > h,tileV = v, SDSstring = bands, outProj="4326")*
>>> > *Error in runGdal(product = product, begin = dates$beginDOY, end =
>>> > dates$endDOY,  : **in argument dataFormat='GTiff', format not
>>> supported by
>>> > GDAL type: 'gdalWriteDriver()' (column 'name') to list available
>>> inputs*
>>> >> sessionInfo()
>>> > R version 3.2.5 (2016-04-14)
>>> > Platform: x86_64-w64-mingw32/x64 (64-bit)
>>> > Running under: Windows 7 x64 (build 7601) Service Pack 1
>>> >
>>> > locale:
>>> > [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United
>>> > States.1252
>>> > [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
>>> >
>>> > [5] LC_TIME=English_United States.1252
>>> >
>>> > attached base packages:
>>> > [1] stats     graphics  grDevices utils     datasets  methods   base
>>> >
>>> > other attached packages:
>>> > [1] MODIS_0.10-34 raster_2.5-2  sp_1.2-3
>>> >
>>> > loaded via a namespace (and not attached):
>>> > [1] tools_3.2.5     Rcpp_0.12.4     grid_3.2.5      lattice_0.20-33
>>> >
>>> >
>>> >
>>> > __________________________________________________
>>> >
>>> > Hakim Abdi | PhD Candidate
>>> > Center for Geobiosphere Science
>>> >
>>> > Department of Physical Geography and Ecosystem Science
>>> > Lund University, Sölvegatan 12, SE-223 62 Lund, Sweden
>>> >
>>> >       [[alternative HTML version deleted]]
>>> >
>>> > _______________________________________________
>>> > R-sig-Geo mailing list
>>> > R-sig-Geo at r-project.org
>>> > https://stat.ethz.ch/mailman/listinfo/r-sig-geo
>>> >
>>>
>>>
>>
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>
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