[R-sig-genetics] genind2hierfstat

[Libby Liggins]

Great, thanks Thibaut!

Libby.

On Thu, Jul 16, 2015 at 10:47 PM, Jombart, Thibaut <t.jombart at imperial.ac.uk
> wrote:

> Hi Libby,
>
> yes, it has been removed from adegenet and internalized in hierfstat. I
> think the idea is that ultimately all procedures in hierfstat will work
> directly with genind objects, so conversion will not be needed any more.
>
> For now, we still cheat, and use genind2hierfstat inside hierfstat. This
> function is hidden (.genind2hierfstat), and not exported. To access it, you
> need:
>
> hierfstat:::.genind2hierfstat
>
> (with the current devel of hierfstat)
>
> Best
> Thibaut
>
> ==============================
> Dr Thibaut Jombart
> MRC Centre for Outbreak Analysis and Modelling
> Department of Infectious Disease Epidemiology
> Imperial College - School of Public Health
> Norfolk Place, London W2 1PG, UK
> Tel. : 0044 (0)20 7594 3658
> http://sites.google.com/site/thibautjombart/
> http://sites.google.com/site/therepiproject/
> http://adegenet.r-forge.r-project.org/
> Twitter: @thibautjombart
>
>
>
> ________________________________________
> From: R-sig-genetics [r-sig-genetics-bounces at r-project.org] on behalf of
> Libby Liggins [libbyliggins at gmail.com]
> Sent: 15 July 2015 20:18
> To: r-sig-genetics at r-project.org
> Subject: [R-sig-genetics] genind2hierfstat
>
> Hi Thibaut and Jerome -
>
> The interoperability that you are building between your packages is
> fantastic! But, I am having trouble with the genind2hierfstat function. It
> doesn't seem to exist in either adegenet 2.0 or the development version of
> hierfstat. I apologise if I missing something.
>
> Thanks,
> Libby.
>
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