[R-sig-dyn-mod] stiff ode - accuracy default values

Thomas Petzoldt thomas.petzoldt at tu-dresden.de
Fri Apr 29 14:51:53 CEST 2016


Dear Radovan,

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Thomas Petzoldt
(mailing list moderator)


On 29.04.2016 14:39, Radovan Omorjan wrote:
> Hello,
>
> Here is one of my test examples for stiff ode solvers (attached). I
> tried many lsoda based solvers in different software and they usually
> can solve this problem with their default parameter values (accuracy
> etc.). By using ode() from deSolve, it seems that I have to reduce the
> values of atol and rtol in order to get the expected profiles. There is
> no method using the default accuracy values I tried which will give me
> the profile I expect.
>
> The problem with these equations become problematic when times riches
> around 16.33. After that time the value of B should be constant and for
> S should be zero.
>
> I just wanted to send this example to the mailing list and hope there
> might be any comment about it. In the first place, I hope that the
> authors of deSolve might consider this example regarding the default
> values of atol and rtol.
>
> Best Regards,
> Radovan
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