[R-sig-DB] Connection with MySQL usin RMySQL package

Jeffrey Horner je||@horner @end|ng |rom v@nderb||t@edu
Mon Feb 23 15:53:51 CET 2009


Prof Brian Ripley wrote:
> On Sun, 22 Feb 2009, Jim Burke wrote:
> 
>> Everyone,
>>
>> Two things that might help. First the version of your computer when 
>> connecting. Second how to connect. Also I do not think that MYSQL 5.1 
>> will work with R at as of today 22.02.2009.
> 
> I certainly does.  But the R Windows binary on CRAN was compiled agiant 
> MySQL 5.0.x, and so you need to compile RySQ from the sources.

In fact, I have provided a binary compiled against MySQL 5.1 on the 
RMySQL website:

http://biostat.mc.vanderbilt.edu/RMySQL

Jeff

> 
> See the arhives of this lists, R-help ....
> 
>> MY PC VERSIONS THAT **DID NOT WORK** ARE BELOW
>> ----------------------------------------------
>>
>> OPERATING SYSTEM INFORMATION
>> ----------------------------
>> OS..........: Win XP sp3
>> R...........: 2.8.1
>> RMySQL.dll..: 0.7-3
>> MYSQL.......: 5.31  (problem, has new version of libmySQL.dll that 
>> does not work in R yet).
> 
> There is no such version. and you have been told so before. Presumably 
> you mean 5.1.31.
> 
>> libmySQL.dll: 1/23/2009 3:45am
>>
>> My SOLUTION from Jeffrey Horner was to roll back to MYSQL 5.0 which 
>> worked just fine. Be sure to export your databases and tables using 
>> something like Navicat 8.0 first.
>>
>>
>> HOW TO CONNECT.
>> ----------------------------------------------
>>
>> 0. Your invalid memory sequence rather sounds like your current 
>> session system memory is messed up. REBOOT YOUR PC then try the 
>> following.
>>
>> 1. You probably do not need this since you have 5.0 already. But just 
>> in case you could load MYSQL 5.0 found here (from Jeffry Horner). If 
>> you have MYSQL 5.1 installed, the MYSQL 5.0 install will complain 
>> about already having a mysql service running. So this means that MYSQL 
>> 5.1 needs to be removed before installing MYSQL 5.0 (save your 
>> databases first).
>> http://dev.mysql.com/downloads/mysql/5.0.html
>>
>> 2. MY SQL 5.0 installation instructions. These are very helpful and 
>> saved me lots of trouble.
>>
>> 2A.  You might want to "REMOVE INSTANCE" of your current 5.0 settings 
>> in the MYSQL Server Instance Configuration Wizard. Then establish a 
>> new one with the instructions below. Note the mysql 5.0 setup wants a 
>> root password. That is what it is requesting but it does not quit tell 
>> you. So type in a simple password for root. Then when you connect its 
>> account root and password simple.
>>
>> 2B. Set up MYSQL 5.0
>> http://www.iis-aid.com/articles/how_to_guides/install_and_configure_mysql_5_on_windows?page=0%2C0 
>>
>>
>> R SQL call examples.
>> http://www.phaget4.org/R/R_notes.html
>>
>> Hope this helps,
>> Jim Burke
>>
>>
>>
>>
>> Christophe Dutang wrote:
>>> I think there is problem of compatibility between the MySQL version  
>>> 5.0 and RMySQL. I think you should use MySQL 5.1. Take a look to 
>>> https://stat.ethz.ch/pipermail/r-sig-db/2008q4/000520.html
>>>
>>>
>>> Le 22 févr. 09 à 12:57, Khalid Iqbal a écrit :
>>>
>>>
>>>> R v 2.8.1
>>>> RMySQL v 0.7-3
>>>> MySQL v 5.0
>>>>
>>>> On Sun, Feb 22, 2009 at 4:43 PM, Christophe Dutang  
>>>> <dutangc using gmail.com> wrote:
>>>> Give us information about your configuration the R version, the  
>>>> version of RMySQL, the version of MySQL...
>>>>
>>>> Le 22 févr. 09 à 12:08, Khalid Iqbal a écrit :
>>>>
>>>> hi,
>>>> i am new to R environment. I tried connecting to MySQL databases,  
>>>> but it is
>>>> not getting connected. I am using Windows XP. I got this when i  
>>>> tried to
>>>> incude RMySQL library.
>>>>
>>>> library(RMySQL)
>>>> Loading required package: DBI
>>>> Error in inDL(x, as.logical(local), as.logical(now), ...) :
>>>>  unable to load shared library
>>>> 'C:/PROGRA~1/R/R-28~1.1/library/RMySQL/libs/RMySQL.dll':
>>>>  LoadLibrary failure:  Invalid access to memory location.
>>>>
>>>> Error : .onLoad failed in 'loadNamespace' for 'RMySQL'
>>>> Error: package/namespace load failed for 'RMySQL'
>>>>
>>>> Please help me.
>>>>
>>>> Regards,
>>>> khalid
>>>>
>>>>        [[alternative HTML version deleted]]
>>>>
>>>> _______________________________________________
>>>> R-sig-DB mailing list -- R Special Interest Group
>>>> R-sig-DB using stat.math.ethz.ch
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>>>>
>>>> -- 
>>>> Christophe Dutang
>>>> Ph. D. student at ISFA, Lyon, France
>>>> website: http://dutangc.free.fr
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>
>>> -- 
>>> Christophe Dutang
>>> Ph. D. student at ISFA, Lyon, France
>>> website: http://dutangc.free.fr
>>>
>>>
>>>
>>>
>>>
>>>     [[alternative HTML version deleted]]
>>>
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