[R-pkg-devel] dependency on a bioconductor package

[m@i@lb@ m@ili@g off @lum@i@uv@es]

(sorry about the replay, my mistake)

ok, then I guess that is the problem...I do not depend on BiocInstaller so it must be one of my dependencies.


Thank you very much!

Maribel


> (don't forget to 'reply all', so that others may benefit / contribute to 
> the conversation).
> 
> You or one of the packages your package depends on must Depend: or 
> Import: BiocInstaller. If it is your package, then you should no longer 
> do so. If it is one of the packages your package depends on, then the 
> responsible thing to do is to contact the author of that package and 
> indicate that they should update their package to no longer depend on 
> BiocInstaller.
> 
> I do not know how the CRAN team will view this warning; I would guess 
> that, if it is not directly under your control, then they will not be 
> overly concerned about it.
> 
> Martin
> 
> On 10/5/18 1:35 PM, maialba using alumni.uv.es wrote:
> > Hello Morgan,
> > 
> > thank you for the replay but, how should I solve the problem in my package? I did install CAMERA using BiocManager in my computer and my package works fine. I do not get any warnings when I run R CDM check but the problem appears when I try to submit it to CRAN.
> > 
> > Maribel
> > 
> > 
> >> BiocInstaller has been replaced by the CRAN package BiocManager; the
> >> appropriate way to install Bioconductor packages is
> >> BiocManager::install(). See the vignette at
> >>
> >> https://cran.r-project.org/web/packages/BiocManager/vignettes/BiocManagerhtml
> >>
> >> Martin
> >>
> >>
> >> On 10/5/18 5:36 AM, maialba using alumni.uv.es wrote:
> >>> I do not know how to solve this warning. I guess it comes from the package dependency on CAMERA (bioconductor) but I can´t solve it.
> >>>
> >>> https://win-builder.r-project.org/incoming_pretest/LipidMS_1.0.0_20181005_103151/Windows/00check.log>
> >>>
> >>> ______________________________________________
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> >>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >>
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> >>
> > 
> > 
>