[R-pkg-devel] dependency on a bioconductor package
mtmorg@n@bioc @ending from gm@il@com
Fri Oct 5 19:58:09 CEST 2018
(don't forget to 'reply all', so that others may benefit / contribute to
You or one of the packages your package depends on must Depend: or
Import: BiocInstaller. If it is your package, then you should no longer
do so. If it is one of the packages your package depends on, then the
responsible thing to do is to contact the author of that package and
indicate that they should update their package to no longer depend on
I do not know how the CRAN team will view this warning; I would guess
that, if it is not directly under your control, then they will not be
overly concerned about it.
On 10/5/18 1:35 PM, maialba using alumni.uv.es wrote:
> Hello Morgan,
> thank you for the replay but, how should I solve the problem in my package? I did install CAMERA using BiocManager in my computer and my package works fine. I do not get any warnings when I run R CDM check but the problem appears when I try to submit it to CRAN.
>> BiocInstaller has been replaced by the CRAN package BiocManager; the
>> appropriate way to install Bioconductor packages is
>> BiocManager::install(). See the vignette at
>> On 10/5/18 5:36 AM, maialba using alumni.uv.es wrote:
>>> I do not know how to solve this warning. I guess it comes from the package dependency on CAMERA (bioconductor) but I can´t solve it.
>>> R-package-devel using r-project.org mailing list
>> R-package-devel using r-project.org mailing list
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