[R] wgcna

Peter Langfelder peter.langfelder at gmail.com
Tue Jul 12 22:59:51 CEST 2011


Hi Meeta,

yes, there was a bug in the package. Please install the newest version
and try again.

Best,

Peter

On Tue, Jul 12, 2011 at 1:20 PM, mistrm <meeta.mistry at gmail.com> wrote:
> Hi Peter and Raquel
>
> I am following the same tutorial and seem to have the same error appear and
> I am using 30 permutations (code below). Is it a bug or something that I can
> easily fix? I'm not quite sure how to interpret the error.
>
> multiExpr = list(A1=list(data=t(ctl)),A2=list(data=t(sz)))
> multiColor = list(A1 = modulesCTL)
> mp=modulePreservation(multiExpr, multiColor, referenceNetworks=1, verbose=3,
> networkType="signed",
>        nPermutations=30, maxGoldModuleSize=100, maxModuleSize=400)
>
> Error in zAll[, stat] = z :
>  number of items to replace is not a multiple of replacement length
>
> Any help would be great, thanks!
> Meeta
>
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