[BioC] parsing discrete colors in pathview KEGG

[Simran Azariah]

Hi Luo,


I want to map some TF enrichment data for each gene in a KEGG pathway. I am able to compartmentalize the gene boxes by using the multi.state parameter. I have been trying to pass a discrete set of colors for each representation. 

Is there a way we could parse a color in mol.col column for each corresponding  mol.data column. 

I want to show multiple TF for each gene in different colors on the KEGG pathway. 

I’ll be extremely grateful if you could guide me on this


regards,


Solomon Azariah

Programmer/Analyst
Geschwind lab
Department of Neurology
David Geffen School of Medicine
UCLA