[BioC] mzR install requires deprecated header file

[James W. MacDonald]

Hi Rob,

mzR-1.9.4 is a devel version, so you need to first install a release 
candidate version of R, and then run biocLite() to install.

http://cran.r-project.org/src/base-prerelease/

Best,

Jim



On Monday, February 10, 2014 12:57:01 PM, Rob [guest] wrote:
>
> Hi,
>
> I am currently trying to install mzR in R 3.02. I am getting this error:
>
> pwiz/utility/misc/sha1calc.cpp:29:36: fatal error: Rcpp/iostream/Rostream.h: No such file or directory
>   #include <Rcpp/iostream/Rostream.h>
>
> I saw this link:
> http://permalink.gmane.org/gmane.comp.lang.r.rcpp/6676
>
> that suggests this is a known issue and fixed in mzR-1.9.4.
>
> I'm not terribly familiar with R. How can I install this specific, updated version of mzR? Right now I am using biocLite("mzR").
>
> Many thanks!
> Rob
>
>   -- output of sessionInfo():
>
> na
>
> --
> Sent via the guest posting facility at bioconductor.org.
>
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--
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
4225 Roosevelt Way NE, # 100
Seattle WA 98105-6099