[BioC] Data set for comparing statistical tests

[Jorge Miró]

Thank you very much for the fast answer. I will take a look at the package

Best regards
Jorge Miró

On Fri, Aug 31, 2012 at 12:01 PM, Benilton Carvalho
<beniltoncarvalho at gmail.com> wrote:
> check the SpikeIn package... in particular the phenoData slot for the
> datasets available. b
>
> On 31 August 2012 10:58, Jorge Miró <jorgma86 at gmail.com> wrote:
>> Hi everybody,
>>
>> I need to compare Student's t-test and the test implemented in the
>> limma package. Does any body has an idea of how I should do?
>>
>> I guess I need a data set with already known differentially expressed
>> genes (maybe this can be done by specially designing the probesets in
>> the used arrays?) and then compare the results of a t-tests and limma
>> test with the expected differentially expressed genes. Where can I get
>> such a data set?
>>
>> Sorry if the question is a bit stupid but I'm new to microarray
>> analysis and statistics... By the way, should this kind of questions
>> be posted here or should I use another forum?
>>
>>
>>
>> Best regards
>> Jorge
>>
>> _______________________________________________
>> Bioconductor mailing list
>> Bioconductor at r-project.org
>> https://stat.ethz.ch/mailman/listinfo/bioconductor
>> Search the archives:
>> http://news.gmane.org/gmane.science.biology.informatics.conductor