[BioC] Data set for comparing statistical tests

Benilton Carvalho beniltoncarvalho at gmail.com
Fri Aug 31 12:01:13 CEST 2012

check the SpikeIn package... in particular the phenoData slot for the
datasets available. b

On 31 August 2012 10:58, Jorge Miró <jorgma86 at gmail.com> wrote:
> Hi everybody,
> I need to compare Student's t-test and the test implemented in the
> limma package. Does any body has an idea of how I should do?
> I guess I need a data set with already known differentially expressed
> genes (maybe this can be done by specially designing the probesets in
> the used arrays?) and then compare the results of a t-tests and limma
> test with the expected differentially expressed genes. Where can I get
> such a data set?
> Sorry if the question is a bit stupid but I'm new to microarray
> analysis and statistics... By the way, should this kind of questions
> be posted here or should I use another forum?
> Best regards
> Jorge
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