[BioC] Openening qPCR file from ABI

[Prof. Dr. Matthias Kohl]

Dear Philippe,

without the R code you've used, it is hard to say what has caused the 
errors. Which errors?

Best,
Matthias

On 09.08.2012 06:06, Philippe [guest] wrote:
>
> Hi,
>
> a colleague of mine gave me a 'sds' file, containing Real-Time PCR data from an ABI machine. I am currently trying to open it using the "ReadqPCR" package, but I am getting errors using it. So maybe someone knows another package/way which I could go to open this file?
>
> Best,
>   Philippe
>
>   -- output of sessionInfo():
>
> R version 2.15.0 (2012-03-30)
> Platform: i686-pc-linux-gnu (32-bit)
>
> locale:
>   [1] LC_CTYPE=de_DE.UTF-8       LC_NUMERIC=C
>   [3] LC_TIME=de_DE.UTF-8        LC_COLLATE=de_DE.UTF-8
>   [5] LC_MONETARY=de_DE.UTF-8    LC_MESSAGES=de_DE.UTF-8
>   [7] LC_PAPER=C                 LC_NAME=C
>   [9] LC_ADDRESS=C               LC_TELEPHONE=C
> [11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> other attached packages:
> [1] ReadqPCR_1.2.0     affy_1.34.0        Biobase_2.16.0     BiocGenerics_0.2.0
>
> loaded via a namespace (and not attached):
> [1] affyio_1.24.0         BiocInstaller_1.4.7   preprocessCore_1.18.0
> [4] zlibbioc_1.2.0
>
> --
> Sent via the guest posting facility at bioconductor.org.
>
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-- 
Prof. Dr. Matthias Kohl
www.stamats.de