[BioC] error in loading GLAD package

Martin Morgan mtmorgan at fhcrc.org
Wed Nov 9 22:15:29 CET 2011


On 11/09/2011 09:56 AM, Qian Liu wrote:
> Hi all,
> I have trouble loading GLAD package, does someone know what the error
> mean? also there is a pop-up window saying system error, missing
> libgsl-0.dll
> Thanks,

Hi Qian -- on the package home page

http://bioconductor.org/packages/release/bioc/html/GLAD.html

the 'System Requirements' field notes that

gsl. Note: users should have GSL installed. Windows users: 'consult the 
README file available in the inst directory of the source distribution 
for necessary configuration instructions'.

Have you followed those directions?

Best, Martin

> Qian
>>     source("http://bioconductor.org/biocLite.R")
>>      biocLite("GLAD")
>> library(GLAD)
> Error in inDL(x, as.logical(local), as.logical(now), ...) :
>    unable to load shared object
> 'C:/ProgramFiless/R-2.14.0/library/GLAD/libs/i386/GLAD.dll':
>    LoadLibrary failure:  The specified module could not be found.
>
> Error: package/namespace load failed for ‘GLAD’
>> sessionInfo()
> R version 2.14.0 (2011-10-31)
> Platform: i386-pc-mingw32/i386 (32-bit)
>
> locale:
> [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United
> States.1252
> [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
> [5] LC_TIME=English_United States.1252
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> other attached packages:
>   [1] DNAcopy_1.28.0         aroma.affymetrix_2.3.0 affxparser_1.26.1
>     aroma.apd_0.2.0
>   [5] R.huge_0.3.0           aroma.core_2.3.0       aroma.light_1.22.0
>     matrixStats_0.3.0
>   [9] R.rsp_0.6.7            R.cache_0.5.2          R.filesets_1.1.3
>     digest_0.5.1
> [13] R.utils_1.9.3          R.oo_1.8.3             R.methodsS3_1.2.1
>     BiocInstaller_1.2.0
>
> loaded via a namespace (and not attached):
> [1] tools_2.14.0
>
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