[BioC] Problem with EBImage installation on windows 7

[Martin Morgan]

On 01/25/2011 06:40 AM, Evan Misshula wrote:
> http://cran.r-project.org/web/packages/abind/index.html
> 
> Abind is a dependency for bioconductor.  Install the package Abind.  Then at the R prompt type library(abind).  It should return another r prompt '>'.   If you type abind at the prompt.  It will scroll through the code now.  Then repeat your library(EBImage) command.  
> 
> Please cc: the email list with your result so people can find this thread and not give up.
> 
> Best,
> 
> Evan Misshula
> CUNY John Jay
> ________________________________________
> From: Bacha Rehman [bachapk at gmail.com]
> Sent: Tuesday, January 25, 2011 9:05 AM
> To: Evan Misshula
> Subject: Problem with EBImage installation on windows 7
> 
> Dear Sir,
> 
> I have read your article on
> http://permalink.gmane.org/gmane.science.biology.informatics.conductor/32576
> .
> I have some queries and problem about installation of EBImage package
> on R Language.
> I have installed the R version R-2.12.1-win.exe, unzipped
> gtk+_2.22.1-1_win32 to c:\gtk and set
> environment variable to c:\gtk\bin,
> ImageMagick-6.6.7-2-Q16-windows-dll and also installed package for R
> Language by Packages>Install packeges from local zip files and select
> the zip file of "EBImage_3.6.0", but it giving error message when i
> run the command
>> library(EBImage)
> it shows me the error and warning message as :
> 
> Loading required package: abind
> Error: package 'abind' could not be loaded
> In addition: Warning message: In library(pkg, character.only = TRUE,
> logical.return = TRUE, lib.loc = lib.loc) :  there is no package called 'abind'

One would normally follow the instructions at

  http://bioconductor.org/install/index.html

e.g.,

  source("http://bioconductor.org/biocLite.R")
  biocLite("EBImage')

this will install the EBImage package and it's dependencies, provided
the additional system dependencies are satisfied.

Martin
> 
> 
> I am using windows 7 32bits.
> Please help.
> 
> Thank you in advance
> 
> 
> --
> Bacha Rehman
> MS Scholar,
> Faculty of Computer Science and Engineering
> GIK Institute of Engineering Science and Technology, Topi, Swabi,
> Pakistan (www.giki.edu.pk)
> Office- +92-938-271858, Ext - 2454
> Cell- +92-300-8336924
> Email- bacha at giki.edu.pk, bachapk at gmail.com
> 
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