[BioC] Cell cycle analysis

[Annette M Hynes]

Thanks, Wolfgang.  

I have looked at the different flow cytometry packages, but I haven't found anything for deconvoluting DNA histograms.  This might be because I'm also getting blanks for many of the "reference manuals."  Have I missed something?

Annette

---------------------
Annette M. Hynes, PhD
Postdoctoral Research Associate
University of Georgia
Department of Marine Sciences
247 Marine Science Building
Athens, GA  30602-3636
tel:  706-542-2405



------------------------------

Message: 13
Date: Fri, 21 Jan 2011 01:44:53 +0100
From: Wolfgang Huber <whuber at embl.de>
To: bioconductor at r-project.org
Subject: Re: [BioC] Cell cycle analysis
Message-ID: <4D38D705.6040801 at embl.de>
Content-Type: text/plain; charset=ISO-8859-1; format=flowed


Annette,

besides the basic R functions for thresholding, clustering, mixture
modelling, have you looked at the flow* packages already? -
http://www.bioconductor.org/help/workflows/high-throughput-assays

        Best wishes
        Wolfgang

Il Jan/20/11 5:57 PM, Annette M Hynes ha scritto:
>   Greetings.
>
> I was wondering if anyone knew of an R package for cell cycle analysis.  I would like to deconvolve DNA histograms from flow cytometry data into S, G1, and G2 phases.  Someone had asked this same question 5 years ago, and I was hoping there might have been some developments.
>
> Thanks,
>
> Annette
>
> ---------------------
> Annette M. Hynes, PhD
> Postdoctoral Research Associate
> University of Georgia
> Department of Marine Sciences
> 247 Marine Science Building
> Athens, GA  30602-3636
> tel:  706-542-2405
>
>       [[alternative HTML version deleted]]
>
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--


Wolfgang Huber
EMBL
http://www.embl.de/research/units/genome_biology/huber