[BioC] how could be the genes annotated using bioconductor, whose genelist contatining database is not present in the bioconductor.

Steve Lianoglou mailinglist.honeypot at gmail.com
Wed Jan 19 16:30:09 CET 2011


Hi,

On Wed, Jan 19, 2011 at 1:29 AM, Budhayash Gautam
<budhayashgautam at gmail.com> wrote:
> Hello friends,
>
> my question is:
>
> how could be the genes annotated using bioconductor, whose genelist
> contatining database is not present in the bioconductor.
>
> as i am working on toxoplasma gondii smd data and there is no database
> related to that. how could i do annotation to this kind of data.

Do you have gene annotation data from elsewhere?

How would you like to use the annotation data once you "have it" in
bioconductor?

I think providing a bit more information on the problem you're trying
to solve will get you some more useful hints from the community.

-steve

-- 
Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact



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