[BioC] error in library(affy)

Mayte Suarez-Farinas farinam at mail.rockefeller.edu
Thu Oct 21 21:14:51 CEST 2010


Hi,
I just installed R.2.12
and started installing BioC packages using bioCLite.
everything worked ok but of all libraries I installed the 'affy' is  
not working.
The library is installed though.

library(affy)
Error in dyn.load(file, DLLpath = DLLpath, ...) :
   unable to load shared object '/Library/Frameworks/R.framework/ 
Versions/2.12/Resources/library/affyio/libs/x86_64/affyio.so':
   dlopen(/Library/Frameworks/R.framework/Versions/2.12/Resources/ 
library/affyio/libs/x86_64/affyio.so, 6): Library not loaded: /Library/ 
Frameworks/R.framework/Versions/2.11/Resources/lib/libR.dylib
   Referenced from: /Library/Frameworks/R.framework/Versions/2.12/ 
Resources/library/affyio/libs/x86_64/affyio.so
   Reason: image not found
Error: package/namespace load failed for 'affy'


sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)

locale:
[1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] lattice_0.19-13 limma_3.6.0     edgeR_1.8.0     Biobase_2.10.0

loaded via a namespace (and not attached):
[1] grid_2.12.0  tools_2.12.0



Mayte Suarez-Farinas
Research Associate, The Rockefeller University
Biostatistician, The Rockefeller University Hospital
1230 York Ave, Box 178,
New York, NY, 10065
+1(212) 327-8213



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