[BioC] Agilent 2-color Microarray data analysis tutorial

[Martin Morgan]

Martin Morgan wrote:
> Hi Chuming --
> 
> Chuming Chen wrote:
>> Dear All,
>>
>> Can anybody point a tutorial on Agilent 2-color Microarray data analysis
>> including pre-processing, statistical analyses, Gene set enrichment
>> analysis, Clustering and visualization etc.?
> 
> The limma vignette is a very useful general purpose starting point,
> 
>   http://bioconductor.org/packages/2.5/bioc/html/limma.html
> 
> as are the workshop resources related to microarray analysis
> 
>   http://bioconductor.org/workshops/
> 
> and common workflows
> 
>   http://bioconductor.org/docs/workflows/index.html

also the Bioconductor case studies book provides a very useful extended
tutorial

  http://bioconductor.org/pub/biocases/

> 
> Martin
> 
>> Thanks,
>>
>> Chuming
>>
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> 
> 


-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
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