[BioC] GO terms

Heidi Dvinge heidi at ebi.ac.uk
Tue Feb 16 00:53:38 CET 2010


Hello Adrian,

if you just want the term and nothing else you can say e.g.

> library(GO.db)
Loading required package: AnnotationDbi
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DBI
> Term("GO:0006916")
      GO:0006916
"anti-apoptosis"


HTH
\Heidi
> Dear Group,
> Is there any function in GOstats or other packages,  that could give
> term name given GO ID.
>
> I have the result from probeSetSummary. I want to pull the GO term
> name along with GO term ID.
>
> Thanks
> Adrian
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor
>



More information about the Bioconductor mailing list