[BioC] Installing problems of Flow Cytometry on Ubuntu Karmic

Philipp Meng philipp.meng at meduniwien.ac.at
Sun Feb 7 23:19:38 CET 2010


Dear All,


I experience installation problems of the Flow Cytometry Packages on
Ubuntu Karmic 9.10.
My R version is 2.9.2

I can only install parts of the packages mentioned on the following
page:
http://bioconductor.org/docs/workflows/flowoverview/

I always get errormessages like this one:
####begin error msg
> biocLite("flowMerge")
Using R version 2.9.2, biocinstall version 2.4.13.
Installing Bioconductor version 2.4 packages:
[1] "flowMerge"
Please wait...

Warnung in install.packages(pkgs = pkgs, repos = repos, dependencies =
dependencies,  :
  argument 'lib' is missing: using '/usr/local/lib/R/site-library'
Warnmeldung:
In getDependencies(pkgs, dependencies, available, lib) :
  package ‘flowMerge’ is not available
####end error msg

I really appreciate your help!
Thanks in advance!

Greetings,

Philipp



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