[BioC] link to KEGG

Sean Davis seandavi at gmail.com
Thu Feb 4 16:56:43 CET 2010


On Thu, Feb 4, 2010 at 10:39 AM, Marcos Pinho
<pinho.microarray at gmail.com> wrote:
> Dear list,
>
> I have search extensively old postings but could not find an easy
> explanation on how to link my gene list generated after a diferential
> expression analysis with limma to a kegg pathway analysis. Any help would be
> greatly appreciated. Please keep in mind that I am a molecular biologist
> that can navigate through R , but it is always a challenge, therefore
> details and or examples are very helpful!

Hi, Marcos.  What array type are you using?  Also, when writing to the
list, it is always a good idea to include the output of sessionInfo(),
just so that we are all on the same page when answering.

Sean



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