[BioC] GOstats and htmlReport
Loren Engrav
engrav at u.washington.edu
Mon Apr 26 03:13:05 CEST 2010
Hi
Have GOstats up and see
> GOstatsSummary01 <- summary(GOstatsOver01, htmlLinks="true")
> class(GOstatsSummary01)
[1] "data.frame"
> htmlReport(GOstatsSummary01, file="GOstatsSummary01.html")
Error in function (classes, fdef, mtable) :
unable to find an inherited method for function "htmlReport", for
signature "data.frame"
What am I missing please?
Thank you
=================
> sessionInfo()
R version 2.11.0 (2010-04-22)
x86_64-apple-darwin9.8.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] grid stats graphics grDevices utils datasets methods
base
other attached packages:
[1] SparseM_0.85 RBGL_1.24.0 Rgraphviz_1.26.0
xtable_1.5-6 RColorBrewer_1.0-2 GOstats_2.14.0 graph_1.26.0
Category_2.14.0
[9] genefilter_1.30.0 annotate_1.26.0 GO.db_2.4.1
hgu133plus2.db_2.4.1 org.Hs.eg.db_2.4.1 RSQLite_0.8-4 DBI_0.2-5
AnnotationDbi_1.10.0
[17] ALL_1.4.7 Biobase_2.8.0
loaded via a namespace (and not attached):
[1] GSEABase_1.10.0 splines_2.11.0 survival_2.35-8 tools_2.11.0
XML_2.8-1
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