[BioC] load failed for 'Rlibstree'

[Seth Falcon]

Hi Paul,

On 4/8/10 10:21 AM, Paul Shannon wrote:
> While working my way through the rtracklayer pdf, I get stuck when
>
>    library (microRNA)
>
> tries to load Rlibstree, with this error message:
>
>    Loading required package: Rlibstree
>    Error in dyn.load(file, DLLpath = DLLpath, ...) :
>      unable to load shared library '/Library/Frameworks/R.framework/Resources/library/Rlibstree/libs/x86_64/Rlibstree.so':
>      dlopen(/Library/Frameworks/R.framework/Resources/library/Rlibstree/libs/x86_64/Rlibstree.so, 6): Symbol not found: _lst_alg_longest_repeated_substring
>     Referenced from: /Library/Frameworks/R.framework/Resources/library/Rlibstree/libs/x86_64/Rlibstree.so
>     Expected in: dynamic lookup
>
>    Error: package 'Rlibstree' could not be loaded
>
> The package is installed (version 0.3-2) on my OS X 10.6.3 MacBook.
>
> Any suggestions?  SessionInfo follows.

Have you tried reinstalling?  I just did

biocLite(c("microRNA", "Rlibstree"))

And both packages load fine on my Mac where I'm building packages from 
source.

+ seth

-- 
Seth Falcon
Bioconductor Core Team | FHCRC