[BioC] load failed for 'Rlibstree'

Paul Shannon pshannon at systemsbiology.org
Thu Apr 8 19:21:45 CEST 2010


While working my way through the rtracklayer pdf, I get stuck when 

  library (microRNA)

tries to load Rlibstree, with this error message:

  Loading required package: Rlibstree
  Error in dyn.load(file, DLLpath = DLLpath, ...) :
    unable to load shared library '/Library/Frameworks/R.framework/Resources/library/Rlibstree/libs/x86_64/Rlibstree.so':
    dlopen(/Library/Frameworks/R.framework/Resources/library/Rlibstree/libs/x86_64/Rlibstree.so, 6): Symbol not found: _lst_alg_longest_repeated_substring
   Referenced from: /Library/Frameworks/R.framework/Resources/library/Rlibstree/libs/x86_64/Rlibstree.so
   Expected in: dynamic lookup

  Error: package 'Rlibstree' could not be loaded

The package is installed (version 0.3-2) on my OS X 10.6.3 MacBook.

Any suggestions?  SessionInfo follows.

Thanks -

 - Paul

 sessionInfo ()
R version 2.10.1 (2009-12-14)
x86_64-apple-darwin9.8.0

locale:
[1] en_US.utf-8/en_US.utf-8/C/C/en_US.utf-8/en_US.utf-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
 [1] Biostrings_2.14.12   IRanges_1.4.8        limma_3.2.1          genefilter_1.28.2    humanStemCell_0.2.3  hgu133plus2.db_2.3.5 org.Hs.eg.db_2.3.6
 [8] RSQLite_0.7-3        DBI_0.2-4            AnnotationDbi_1.8.0  Biobase_2.6.1        rtracklayer_1.6.0    RCurl_1.2-0          bitops_1.0-4.1
[15] RUnit_0.4.22

loaded via a namespace (and not attached):
[1] annotate_1.24.1 BSgenome_1.14.2 splines_2.10.1  survival_2.35-8 tools_2.10.1    XML_2.6-0       xtable_1.5-6



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