[BioC] XPS vs APT

Daren Tan darentan76 at gmail.com
Mon Mar 23 03:35:57 CET 2009


I am migrating from affymetrix apt-probeset-summarize to XPS. How do I
get expression values via XPS corresponding to the following
apt-probeset-summarize options ?

1) "rma-bg,quant-norm.sketch=-1.usepm=true.bioc=true,pm-only,med-polish"
2) "quant-norm.sketch=-1.bioc=true,pm-only,plier"
3) "quant-norm.sketch=-1.bioc=true,pm-gcbg,plier"
4) "pm-only,dabg"
5) "quant-norm.sketch=-1.bioc=true,pm-only,iter-plier"
6) "quant-norm.sketch=-1.bioc=true,pm-gcbg,iter-plier"



More information about the Bioconductor mailing list