[BioC] Please add hugene10stv1.cdf

[James W. MacDonald]

Hi Matthew,


You might want to look here for options for analyzing exon array data:

http://www.bioconductor.org/docs/workflows/oligoarrays/

Note that affylmGUI isn't an option as the affy package doesn't support 
these chips.

Best,

Jim



Gormley, Matthew wrote:
> Hello,
> 
> I am trying to utilize affylmGUI (using limma in R) to analyze Affymetrix exon array data. Currently there is no way to manually specify a Chip Definition File (CDF) (it is downloaded automatically from http://www.bioconductor.org/data/metaData.html). The cdf I require, 
> hugene10stv1, is not available. Can you please add this cdf to your metadata. Thank you so much.
> 
> Sincerely,
> Matthew Gormley
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor

-- 
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826