[BioC] duplicate entries in org.Hs.egCHRLOC?
Paul Shannon
pshannon at systemsbiology.org
Mon Mar 9 13:26:42 CET 2009
If I ask for the chromosome location of the start of geneID 5004, I get:
> get ('5004', org.Hs.egCHRLOC)
9
116125123
But geneID 20 gets me two identical values:
> get ('20', org.Hs.egCHRLOC)
9 9
-139021506 -139021506
I noticed this after using toTable to create a data.frame from this
environment: I get two identical rows for geneID 20:
> subset (toTable (org.Hs.egCHRLOC), gene_id=='20')
gene_id start_location Chromosome
14 20 -139021506 9
15 20 -139021506 9
Is this the expected behavior?
Thanks!
- Paul
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