[BioC] Graphviz in Vista64
Kasper Daniel Hansen
khansen at stat.berkeley.edu
Mon Mar 2 17:47:55 CET 2009
Most likely something is wrong with your graphviz installation, but
since you don't provide any details about that, it is impossible to
help. We would also like to see the actual crash output from R or a
better description of what you mean by "crash"
Kasper
On Mar 2, 2009, at 7:48 , Sim, Fraser wrote:
> Hi Bioconductors,
>
> Has anyone successfully used the Rgraphviz package to plot graphs in R
> under Vista64??
>
> I have found that RGUI.EXE crashes upon execution of the layoutGraph
> step.
>
> Running the following reliably crashes R.
>
> library("Rgraphviz")
> g = new("graphNEL", nodes = c("a","b","c"))
> debug(Rgraphviz:::graphLayout)
> sessionInfo()
> layoutGraph(g)
>
> Thanks,
> Fraser
>
> PS. The crash occurs in :
>
> Rgraphviz:::graphLayout
> .Call("Rgraphviz_doLayout",graph,as.integer(type),PACKAGE="Rgraphviz")
>
> PPS.
> sessionInfo()
>
> R version 2.8.1 (2008-12-22)
> i386-pc-mingw32
>
> locale:
> LC_COLLATE=English_United States.1252;LC_CTYPE=English_United
> States.1252;LC_MONETARY=English_United
> States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252
>
> attached base packages:
> [1] grid stats graphics grDevices utils datasets
> methods
>
> [8] base
>
> other attached packages:
> [1] Rgraphviz_1.20.3 graph_1.20.0 rcom_2.0-4 rscproxy_1.0-12
>
> loaded via a namespace (and not attached):
> [1] cluster_1.11.12 tools_2.8.1
>
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