[BioC] Error using crlmm

Carvalho, Benilton bcarvalh at jhsph.edu
Tue Jun 23 15:38:39 CEST 2009


What's your sessionInfo()?

b

On 23/06/2009, at 00:38, "mcoyne at boninc.com" <mcoyne at boninc.com> wrote:

> I'm learning to use crlmm(); I tested out with one sample .CEL file
> from affy SNP500K genechip, genotyping.  I'm using Bioconductor on
> MAC OS 10.5; R version 2.9.0; bioconductor version
> 2.4.     I keep getting the following error, and not able to figure
> out how to fix it; I appreciate any help.  Thank you for your help.
>
>> crlmm (fulFileNames,outputDir,verbose=TRUE)
> Preparing environment for normalization.
> Normalization.
> Error in if (nb == .nb && pc == .pc) return() :
>  missing value where TRUE/FALSE needed
>
> My Coyne
> mcoyne at boninc.com
>
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