[BioC] Problem with two expression sets

Joern Toedling Joern.Toedling at curie.fr
Mon Jun 8 17:17:23 CEST 2009


Hello,

please have a look at the 'combine' method from the Biobase package.
Try

D <- combine(eset2, eset.1)

If that does not work for you, please provide the detailed error message and
the output of function sessionInfo().

Best regards,
Joern

On Mon, 8 Jun 2009 16:49:09 +0200, Alberto Goldoni wrote
> Hi to everybody,
> i have a problem with 2 expressionsets:
> 
> > pData(eset.1)
>              sample
> WK-PUFA3.CEL      5
> WK-PUFA4.CEL      6
> WK-st1.CEL        7
> WK-st2.CEL        8
> 
> and:
> 
> > pData(eset2)
>               sample
> SHR-PUFA5.CEL      1
> SHR-PUFA6.CEL      2
> SHR-st7.CEL        3
> SHR-st8.CEL        4
> 
> i would like to obtain only one dataset that included this two, so i 
> would like to obtain something like this:
> 
> > pData(data.rma)
>               sample
> SHR-PUFA5.CEL      1
> SHR-PUFA6.CEL      2
> SHR-st7.CEL        3
> SHR-st8.CEL        4
> WK-PUFA3.CEL       5
> WK-PUFA4.CEL       6
> WK-st1.CEL         7
> WK-st2.CEL         8
> 
> best regards.
> 
> -- 
> -----------------------------------------------------
> Dr. Alberto Goldoni
> Bologna, Italy
> -----------------------------------------------------
> 
> 	[[alternative HTML version deleted]]
> 
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---
Joern Toedling
Institut Curie -- UMR218
26 rue d'Ulm, 75005 Paris, FRANCE
Tel. +33 (0)156246942



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